Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 HMGB3P6-201ENST00000444896 598 ntBASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 AC008481.1-201ENST00000463278 396 ntBASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 AC090071.1-201ENST00000507713 644 ntBASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 AC118465.1-201ENST00000513820 1271 ntBASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 RN7SKP283-201ENST00000517197 270 ntBASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 AC027309.2-201ENST00000520566 192 ntBASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 NTAN1P1-201ENST00000603150 646 ntBASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 IGHV3-29-201ENST00000604817 344 ntBASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 AL591516.1-201ENST00000611326 274 ntBASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RPAP1Q9BWH6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 AP001148.1-201ENST00000624124 2359 ntBASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 SNORD15B-201ENST00000384714 146 ntBASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 RPL32P35-201ENST00000415214 394 ntBASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 AC005189.1-201ENST00000431286 310 ntBASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 AC108734.1-201ENST00000439549 399 ntBASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 AC016696.1-201ENST00000446949 318 ntBASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 SETP12-201ENST00000514068 805 ntBASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 AP001180.3-201ENST00000582221 145 ntBASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 PRELID3BP8-201ENST00000604148 295 ntBASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 AP003117.2-201ENST00000606010 545 ntBASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 AC113194.1-201ENST00000606037 500 ntBASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 HPVC1-201ENST00000629899 1198 ntBASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 SAGE4P-201ENST00000442271 3381 ntBASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.72□□□□□ -1.81
RPAP1Q9BWH6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
RPAP1Q9BWH6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
RPAP1Q9BWH6 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 DCAF13P3-201ENST00000561147 1334 ntBASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 SNORA70E-201ENST00000384492 135 ntBASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 RNU6-1005P-201ENST00000384519 107 ntBASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 UQCRHP3-201ENST00000451503 251 ntBASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 PTP4A1P6-201ENST00000531034 478 ntBASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 LINC00557-201ENST00000563184 1279 ntBASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 AL118556.2-201ENST00000614375 824 ntBASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 AC004943.3-201ENST00000624116 600 ntBASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 AC021755.1-201ENST00000559747 1447 ntBASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 MTCO1P24-201ENST00000515438 1558 ntBASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 MTND5P27-201ENST00000428871 1720 ntBASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 AF127577.6-201ENST00000623352 2191 ntBASIC3.71□□□□□ -1.82
RPAP1Q9BWH6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 AC091152.2-201ENST00000591628 2569 ntBASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 RNU6-543P-201ENST00000362576 108 ntBASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 PNRC2P1-201ENST00000423940 420 ntBASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 NEK4P1-201ENST00000433383 879 ntBASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 PRDX3P4-201ENST00000470828 747 ntBASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 AC104689.1-201ENST00000473356 768 ntBASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 AC004924.1-201ENST00000480160 781 ntBASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 C1DP5-201ENST00000525775 383 ntBASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 KATNBL1P5-201ENST00000605015 517 ntBASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms