Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 PSMA3P-201ENST00000555485 635 ntBASIC5.13□□□□□ -1.59
TM9SF2Q99805 MIR4742-201ENST00000581069 85 ntBASIC5.13□□□□□ -1.59
TM9SF2Q99805 AL669831.4-202ENST00000590817 238 ntBASIC5.13□□□□□ -1.59
TM9SF2Q99805 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.13□□□□□ -1.59
TM9SF2Q99805 AC005498.1-201ENST00000592125 465 ntBASIC5.13□□□□□ -1.59
TM9SF2Q99805 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.13□□□□□ -1.59
TM9SF2Q99805 AC005034.5-201ENST00000604219 466 ntBASIC5.13□□□□□ -1.59
TM9SF2Q99805 AL008729.2-201ENST00000606393 473 ntBASIC5.13□□□□□ -1.59
TM9SF2Q99805 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.13□□□□□ -1.59
TM9SF2Q99805 AC126177.8-201ENST00000618339 1015 ntBASIC5.13□□□□□ -1.59
TM9SF2Q99805 AL603758.1-201ENST00000618654 241 ntBASIC5.13□□□□□ -1.59
TM9SF2Q99805 CU639417.4-201ENST00000623928 207 ntBASIC5.13□□□□□ -1.59
TM9SF2Q99805 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.13□□□□□ -1.59
TM9SF2Q99805 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TM9SF2Q99805 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.13□□□□□ -1.59
TM9SF2Q99805 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.13□□□□□ -1.59
TM9SF2Q99805 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.13□□□□□ -1.59
TM9SF2Q99805 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.13□□□□□ -1.59
TM9SF2Q99805 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TM9SF2Q99805 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TM9SF2Q99805 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF2Q99805 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF2Q99805 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF2Q99805 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF2Q99805 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF2Q99805 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF2Q99805 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 MIR514A2-201ENST00000385131 88 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 MIR514A3-201ENST00000385132 88 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 RNA5SP56-201ENST00000410277 118 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 OR6C66P-201ENST00000414917 930 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC068533.1-201ENST00000418542 415 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 AL645937.1-202ENST00000421799 937 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC018630.2-202ENST00000422992 927 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 RPL23AP38-201ENST00000423801 469 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC005517.2-201ENST00000424673 553 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC005094.1-201ENST00000440420 368 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC005008.1-201ENST00000456151 612 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 HMGB1P25-201ENST00000468402 607 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 RPL32P33-201ENST00000487023 394 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 RN7SL214P-201ENST00000487317 265 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 SNORD116-26-201ENST00000516006 96 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 NRBF2P4-201ENST00000520874 850 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 AP005435.4-201ENST00000529514 284 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 AL442663.2-201ENST00000554385 511 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 AL161729.3-201ENST00000603533 673 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC090948.1-201ENST00000607464 549 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC133644.2-201ENST00000608142 540 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC093838.1-201ENST00000613014 469 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 MIR6826-201ENST00000617808 98 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF2Q99805 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC008079.2-201ENST00000623543 20396 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 LARP1BP1-201ENST00000506036 1359 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC083843.3-201ENST00000623679 2186 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 AP004289.2-201ENST00000444413 1457 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF2Q99805 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.12□□□□□ -1.59
TM9SF2Q99805 TAB3P1-202ENST00000452645 1634 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 AC011493.1-201ENST00000596753 1632 ntBASIC5.12□□□□□ -1.59
TM9SF2Q99805 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TM9SF2Q99805 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TM9SF2Q99805 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.11□□□□□ -1.59
TM9SF2Q99805 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TM9SF2Q99805 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TM9SF2Q99805 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TM9SF2Q99805 AL159987.1-201ENST00000347911 293 ntBASIC5.11□□□□□ -1.59
TM9SF2Q99805 SNORA64.1-201ENST00000362600 132 ntBASIC5.11□□□□□ -1.59
TM9SF2Q99805 U3.7-201ENST00000363668 216 ntBASIC5.11□□□□□ -1.59
TM9SF2Q99805 Y_RNA.373-201ENST00000365600 103 ntBASIC5.11□□□□□ -1.59
TM9SF2Q99805 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.11□□□□□ -1.59
TM9SF2Q99805 Y_RNA.419-201ENST00000384041 102 ntBASIC5.11□□□□□ -1.59
TM9SF2Q99805 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TM9SF2Q99805 AC005522.1-201ENST00000395416 346 ntBASIC5.11□□□□□ -1.59
TM9SF2Q99805 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.11□□□□□ -1.59
TM9SF2Q99805 RNU2-29P-201ENST00000410423 189 ntBASIC5.11□□□□□ -1.59
TM9SF2Q99805 RNU4-78P-201ENST00000410940 126 ntBASIC5.11□□□□□ -1.59
TM9SF2Q99805 RN7SKP140-201ENST00000411196 284 ntBASIC5.11□□□□□ -1.59
TM9SF2Q99805 UBE2FP1-201ENST00000416536 447 ntBASIC5.11□□□□□ -1.59
TM9SF2Q99805 AL161631.1-201ENST00000417933 486 ntBASIC5.11□□□□□ -1.59
TM9SF2Q99805 RPS27AP12-201ENST00000429552 465 ntBASIC5.11□□□□□ -1.59
TM9SF2Q99805 AC018644.1-201ENST00000429934 551 ntBASIC5.11□□□□□ -1.59
TM9SF2Q99805 ELOCP18-201ENST00000434209 337 ntBASIC5.11□□□□□ -1.59
TM9SF2Q99805 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms