Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 RPLP0P7-201ENST00000416050 667 ntBASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 RPL23AP42-201ENST00000471152 471 ntBASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.1□□□□□ -2.07
CSMD1Q96PZ7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 RN7SKP32-201ENST00000410167 303 ntBASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 AC068781.1-201ENST00000488231 618 ntBASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 ZNF861P-201ENST00000588126 639 ntBASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 AC011494.1-201ENST00000596454 237 ntBASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 AC106730.3-201ENST00000624568 641 ntBASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 GABPAP-201ENST00000419271 1356 ntBASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 GCNT6-201ENST00000379591 934 ntBASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 MIR1276-201ENST00000408707 83 ntBASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 AC007064.1-201ENST00000412238 351 ntBASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 MFSD8-245ENST00000641743 948 ntBASIC2.09□□□□□ -2.07
CSMD1Q96PZ7 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CSMD1Q96PZ7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
CSMD1Q96PZ7 AL138820.1-201ENST00000617901 5305 ntBASIC2.09□□□□□ -2.08
CSMD1Q96PZ7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.09□□□□□ -2.08
CSMD1Q96PZ7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.09□□□□□ -2.08
CSMD1Q96PZ7 AC068313.1-201ENST00000604028 1008 ntBASIC2.09□□□□□ -2.08
CSMD1Q96PZ7 AC126118.1-201ENST00000607744 628 ntBASIC2.09□□□□□ -2.08
CSMD1Q96PZ7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CSMD1Q96PZ7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CSMD1Q96PZ7 MTND5P29-201ENST00000458676 1807 ntBASIC2.09□□□□□ -2.08
CSMD1Q96PZ7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 AC087385.1-201ENST00000475062 312 ntBASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 AC026412.2-201ENST00000512270 1075 ntBASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 RNU1-75P-201ENST00000347264 129 ntBASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 NANOGP5-201ENST00000424456 877 ntBASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 MTCO3P11-201ENST00000455103 774 ntBASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 RPL23AP49-201ENST00000492925 468 ntBASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 RN7SKP43-201ENST00000516173 320 ntBASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 AC026464.5-201ENST00000562497 722 ntBASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 AC090115.4-201ENST00000609970 188 ntBASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 AL035551.1-201ENST00000446931 348 ntBASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 AC021146.5-201ENST00000503544 545 ntBASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 AL390334.1-201ENST00000556395 450 ntBASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 AC103710.2-201ENST00000609912 942 ntBASIC2.08□□□□□ -2.08
CSMD1Q96PZ7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 PTP4A1P7-201ENST00000423476 514 ntBASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 AC093278.1-201ENST00000494700 600 ntBASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 AC025881.1-201ENST00000518851 512 ntBASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 AL133271.1-201ENST00000538229 291 ntBASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 AC074029.1-201ENST00000552531 1044 ntBASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 WISP1-OT1-201ENST00000602893 642 ntBASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 RAD1P1-201ENST00000231383 813 ntBASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 EI24P2-201ENST00000397776 1076 ntBASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 AL138878.1-201ENST00000405131 347 ntBASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 SPA17P1-201ENST00000416656 452 ntBASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 VDAC1P3-201ENST00000434069 851 ntBASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 RPL36AP51-201ENST00000487216 318 ntBASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 AC112673.1-201ENST00000513168 575 ntBASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 MIR3199-1-201ENST00000582434 88 ntBASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.07□□□□□ -2.08
CSMD1Q96PZ7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms