Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC069307.1-201ENST00000602820 447 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AL121992.2-201ENST00000606262 256 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 RNU6-89P-201ENST00000606519 100 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AL133215.3-201ENST00000609801 448 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC245517.5-201ENST00000611529 162 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 PABPC1P6-201ENST00000445594 1829 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AL022322.2-201ENST00000624072 20397 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 AC011493.1-201ENST00000596753 1632 ntBASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PTCHD1Q96NR3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC235565.1-201ENST00000456962 1325 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 MTND5P3-201ENST00000438536 1800 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC011978.2-201ENST00000569835 2054 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC067945.1-201ENST00000342609 618 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCHD1Q96NR3 Y_RNA.22-201ENST00000362492 102 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 Y_RNA.387-201ENST00000383918 102 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 MIR19A-201ENST00000384878 82 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 MIR454-201ENST00000390180 115 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTCHD1Q96NR3 MIR1178-201ENST00000408396 91 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 BX510359.3-201ENST00000422168 306 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC099336.2-201ENST00000422457 254 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC108075.1-201ENST00000424692 529 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC105402.2-201ENST00000438503 358 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC104634.1-201ENST00000452720 462 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 PPP1R2P5-201ENST00000457256 603 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC099560.2-201ENST00000457554 255 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 RPS4XP10-201ENST00000465034 731 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC072052.1-201ENST00000496556 306 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 HIGD1AP14-201ENST00000507617 282 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 RFPL4AP5-201ENST00000514977 504 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC026464.5-201ENST00000562497 722 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC008638.3-201ENST00000603341 463 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC103710.2-201ENST00000609912 942 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC116447.1-201ENST00000613153 453 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCHD1Q96NR3 AC112198.2-201ENST00000426589 6996 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5□□□□□ -1.61
PTCHD1Q96NR3 MTND4P27-201ENST00000450813 1354 ntBASIC5□□□□□ -1.61
PTCHD1Q96NR3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AL122126.1-201ENST00000546905 1318 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 SCARNA15-201ENST00000607520 4325 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 RNU1-19P-201ENST00000363306 165 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 Y_RNA.132-201ENST00000363421 102 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 U3.11-201ENST00000364476 212 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 RNU1-43P-201ENST00000365052 165 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 Y_RNA.315-201ENST00000365117 102 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 RNU4-20P-201ENST00000365601 151 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 MIR558-201ENST00000384920 94 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 MIR514A2-201ENST00000385131 88 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 MIR514A3-201ENST00000385132 88 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 RNU4-26P-201ENST00000410270 107 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 RNU2-21P-201ENST00000410368 188 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 OR1AA1P-201ENST00000419597 916 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AL451054.2-201ENST00000420896 202 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 BRK1P2-201ENST00000442875 223 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 RPL21P89-201ENST00000444021 467 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 RAC1P7-201ENST00000445367 377 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms