Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC7Q96M83 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC7Q96M83 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC7Q96M83 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC7Q96M83 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC7Q96M83 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC7Q96M83 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC7Q96M83 AL451074.5-201ENST00000415894 435 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 AL645937.1-202ENST00000421799 937 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 RPS27P5-201ENST00000444247 244 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 AL353718.1-201ENST00000451028 517 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 AC011037.1-201ENST00000483964 558 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 HIGD1AP13-201ENST00000509878 289 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 AC025768.1-201ENST00000510057 267 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 MTND2P31-201ENST00000512602 616 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC7Q96M83 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC7Q96M83 AP003168.1-201ENST00000530091 307 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 AC083760.1-201ENST00000589621 670 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 AL671309.1-201ENST00000603750 544 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC7Q96M83 AC011374.2-201ENST00000607135 526 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 AL359535.1-201ENST00000612100 1087 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 AP006248.3-201ENST00000623580 594 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 AP003072.4-201ENST00000624580 310 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CCDC7Q96M83 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC7Q96M83 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC7Q96M83 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCDC7Q96M83 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC7Q96M83 AC007390.2-201ENST00000606229 3803 ntBASIC4.03□□□□□ -1.76
CCDC7Q96M83 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CCDC7Q96M83 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.03□□□□□ -1.77
CCDC7Q96M83 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 METTL21EP-201ENST00000298105 713 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC7Q96M83 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC7Q96M83 RNU6-650P-201ENST00000365658 111 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC7Q96M83 AL139095.1-201ENST00000404326 391 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 VTA1P1-201ENST00000414044 866 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 AL138785.1-201ENST00000425821 331 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 AC022018.1-201ENST00000430685 241 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 SNORA76.2-201ENST00000517095 137 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 OSBPL9P3-201ENST00000534523 595 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 AC084757.1-201ENST00000559987 490 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 NF1P5-201ENST00000588287 448 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 AC017076.1-201ENST00000607613 578 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 AP001033.2-201ENST00000609701 1003 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 AL355493.4-201ENST00000618530 292 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 CFTRP2-201ENST00000634304 199 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 AL359693.1-201ENST00000614959 2407 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC7Q96M83 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC7Q96M83 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC7Q96M83 RNU1-35P-201ENST00000362782 153 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 AL139413.1-201ENST00000421309 217 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 AL109933.2-201ENST00000452651 260 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 RN7SL432P-201ENST00000484057 298 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC7Q96M83 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 RNU6-1102P-201ENST00000516149 96 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 OR5AK3P-201ENST00000527486 1297 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 AL389895.1-201ENST00000554127 252 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 AC007424.1-203ENST00000554613 687 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 AL157394.1-201ENST00000562983 1224 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 ZNF92P2-201ENST00000600543 1059 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 NRBF2P5-201ENST00000603087 788 ntBASIC4.02□□□□□ -1.77
CCDC7Q96M83 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC7Q96M83 AC008264.2-201ENST00000610193 3731 ntBASIC4.01□□□□□ -1.77
CCDC7Q96M83 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC7Q96M83 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC7Q96M83 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC7Q96M83 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC7Q96M83 RNU6-851P-201ENST00000384565 107 ntBASIC4.01□□□□□ -1.77
CCDC7Q96M83 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC7Q96M83 MIR1303-201ENST00000408625 86 ntBASIC4.01□□□□□ -1.77
CCDC7Q96M83 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC7Q96M83 AC234782.4-201ENST00000417646 1048 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms