Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 AL391497.1-201ENST00000608671 547 ntBASIC4.42□□□□□ -1.7
HERVK_113Q902F9 SCARNA15.3-201ENST00000626315 122 ntBASIC4.42□□□□□ -1.7
HERVK_113Q902F9 SCARNA4.1-201ENST00000628597 123 ntBASIC4.42□□□□□ -1.7
HERVK_113Q902F9 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.42□□□□□ -1.7
HERVK_113Q902F9 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.42□□□□□ -1.7
HERVK_113Q902F9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HERVK_113Q902F9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HERVK_113Q902F9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HERVK_113Q902F9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HERVK_113Q902F9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HERVK_113Q902F9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
HERVK_113Q902F9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HERVK_113Q902F9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 SGO1P2-201ENST00000429458 1589 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 AL049545.1-201ENST00000401856 572 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 HMGB1P17-201ENST00000403495 628 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 MTCYBP38-201ENST00000417160 1123 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 GLRXP1-201ENST00000423261 334 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 RPS6P15-201ENST00000431996 751 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 AC069285.2-201ENST00000440210 275 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 AL645939.1-201ENST00000453429 797 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 LINC00888-204ENST00000487386 421 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 AC104685.1-201ENST00000502445 371 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 BNIP3P41-201ENST00000503774 571 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 AC104986.1-201ENST00000517978 436 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 IGKV2D-19-201ENST00000523346 262 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 MTATP6P15-201ENST00000527233 835 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 AL139174.1-201ENST00000531489 886 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 AL669831.4-202ENST00000590817 238 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 AL139286.1-201ENST00000604465 483 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 AC004825.2-201ENST00000616634 455 ntBASIC4.41□□□□□ -1.7
HERVK_113Q902F9 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HERVK_113Q902F9 MTND5P24-201ENST00000438892 1767 ntBASIC4.4□□□□□ -1.7
HERVK_113Q902F9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
HERVK_113Q902F9 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.4□□□□□ -1.7
HERVK_113Q902F9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.4□□□□□ -1.7
HERVK_113Q902F9 RNU1-44P-201ENST00000384453 163 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 RPL31P1-201ENST00000398116 372 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AL953862.1-201ENST00000423016 168 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AL022400.1-201ENST00000423946 935 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AP000907.1-201ENST00000428428 510 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 VN1R40P-201ENST00000455196 941 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 ATG12P2-201ENST00000456830 416 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AC090453.1-201ENST00000495560 436 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AL358832.1-201ENST00000497800 389 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.4□□□□□ -1.71
HERVK_113Q902F9 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AC022861.1-201ENST00000522981 663 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.4□□□□□ -1.71
HERVK_113Q902F9 CYCSP2-201ENST00000558168 301 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 MTND3P12-201ENST00000559068 328 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AC015813.4-201ENST00000610469 179 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AC079228.1-201ENST00000624774 1049 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AC017037.3-201ENST00000625016 472 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.4□□□□□ -1.71
HERVK_113Q902F9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.4□□□□□ -1.71
HERVK_113Q902F9 U6.105-201ENST00000637379 88 ntBASIC4.4□□□□□ -1.71
HERVK_113Q902F9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.4□□□□□ -1.71
HERVK_113Q902F9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
HERVK_113Q902F9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HERVK_113Q902F9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HERVK_113Q902F9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
HERVK_113Q902F9 RNU5A-2P-201ENST00000384337 116 ntBASIC4.39□□□□□ -1.71
HERVK_113Q902F9 RNU6-821P-201ENST00000390995 107 ntBASIC4.39□□□□□ -1.71
HERVK_113Q902F9 AL356131.1-201ENST00000405826 414 ntBASIC4.39□□□□□ -1.71
HERVK_113Q902F9 SNORA3.3-201ENST00000408712 125 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms