Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AP000403.1-201ENST00000603349 851 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AL390208.1-201ENST00000605885 644 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC103710.4-201ENST00000609301 899 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC007546.1-201ENST00000619452 559 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC007546.2-201ENST00000623996 360 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 BMS1P21-201ENST00000634565 365 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 NMD3P1-201ENST00000439704 1488 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 RNU4-24P-201ENST00000364565 139 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 Y_RNA.436-201ENST00000384097 102 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 MIR23A-201ENST00000385245 73 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 U3.29-201ENST00000391296 212 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 MIR1250-201ENST00000408098 113 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 MTATP6P27-201ENST00000416987 621 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 RPL31P45-201ENST00000419532 356 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 EIF1P3-201ENST00000423841 334 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC007742.1-201ENST00000425789 329 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 ELOCP26-201ENST00000436067 329 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AL590399.6-201ENST00000446396 307 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 TPTE2P5-203ENST00000458118 728 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC079804.1-201ENST00000461922 436 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 VN1R105P-201ENST00000486595 910 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC068724.1-201ENST00000487100 792 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC106872.3-201ENST00000495104 446 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC146944.2-203ENST00000502493 354 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC021678.1-201ENST00000505195 936 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC139495.1-202ENST00000513164 354 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC093853.1-201ENST00000515689 483 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 SNORA67.7-201ENST00000516664 135 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 Y_RNA.695-201ENST00000516715 107 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 RPL12P22-201ENST00000519073 490 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AP004247.1-201ENST00000531556 1289 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC024909.2-201ENST00000553035 286 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AL352979.3-201ENST00000553515 247 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC053481.3-201ENST00000577881 843 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 BNIP3P23-201ENST00000599655 511 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC073544.2-201ENST00000601155 540 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC064872.1-201ENST00000604823 1072 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AL353600.1-201ENST00000608148 251 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC084782.3-201ENST00000612282 578 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HMGB4Q8WW32 MAPK10-303ENST00000641324 3959 ntBASIC4.29□□□□□ -1.72
HMGB4Q8WW32 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AC027290.2-201ENST00000623210 18662 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 Y_RNA.97-201ENST00000363094 102 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 MT-TC-201ENST00000387405 66 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 RNA5SP171-201ENST00000391071 115 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 RNU11-4P-201ENST00000391149 133 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 MIR1305-201ENST00000408300 86 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 RPS27AP14-201ENST00000422868 454 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AL451062.2-201ENST00000427515 271 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 RPL23AP81-201ENST00000455252 467 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AC146507.1-201ENST00000468335 354 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.28□□□□□ -1.72
HMGB4Q8WW32 HMGB1P36-201ENST00000487709 576 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AF213884.1-201ENST00000488102 463 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AC022447.3-201ENST00000506865 495 ntBASIC4.28□□□□□ -1.72
HMGB4Q8WW32 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms