Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC130324.3-201ENST00000614165 542 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AC100827.5-201ENST00000615883 426 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 PANDAR-201ENST00000629595 1506 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC139426.3-201ENST00000605648 2059 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 RN7SKP104-201ENST00000362605 328 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 RNA5SP443-201ENST00000363083 132 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 RNA5SP187-201ENST00000384400 119 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 MIR320B1-201ENST00000390209 79 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC006548.1-201ENST00000427470 102 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 VTI1BP4-201ENST00000427516 527 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 RPL34P6-201ENST00000432390 345 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 NRBF2P3-201ENST00000432731 865 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 HMGB1P12-201ENST00000438594 598 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 RPL21P23-201ENST00000446654 460 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC004980.3-201ENST00000447046 365 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC104308.1-201ENST00000454621 333 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 RPL12P25-201ENST00000455592 494 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 RPL21P71-201ENST00000465598 459 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 HSPD1P15-201ENST00000505573 1122 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 FTH1P9-201ENST00000513251 355 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 RNU6-635P-201ENST00000516651 102 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC008126.1-201ENST00000549019 480 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 MIR5690-201ENST00000583739 73 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 AL022099.1-201ENST00000604551 712 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 uc_338.11-201ENST00000619132 160 ntBASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SHKBP1Q8TBC3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 AC007996.1-201ENST00000620414 2821 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 AC002525.1-201ENST00000624392 1622 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 AC119744.1-201ENST00000454746 1715 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 AL157777.2-201ENST00000258070 137 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 SNURFL-201ENST00000309296 343 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 DHFRP6-201ENST00000401776 268 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 Y_RNA.625-201ENST00000411256 107 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 RPL37P18-201ENST00000411602 243 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 TPMTP2-201ENST00000414372 726 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 EI24P4-201ENST00000423683 1078 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 FABP7P2-201ENST00000429946 379 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 HMGB3P11-201ENST00000440127 604 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 LINC02210-201ENST00000444561 288 ntBASIC5.52□□□□□ -1.53
SHKBP1Q8TBC3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms