Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC127526.1-201ENST00000417526 366 ntBASIC4.27□□□□□ -1.73
NPHP3Q7Z494 RWDD4P2-201ENST00000426392 563 ntBASIC4.27□□□□□ -1.73
NPHP3Q7Z494 AL035407.1-201ENST00000429211 571 ntBASIC4.27□□□□□ -1.73
NPHP3Q7Z494 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.27□□□□□ -1.73
NPHP3Q7Z494 AC068135.1-201ENST00000446164 246 ntBASIC4.27□□□□□ -1.73
NPHP3Q7Z494 GXYLT1P1-201ENST00000446657 490 ntBASIC4.27□□□□□ -1.73
NPHP3Q7Z494 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.27□□□□□ -1.73
NPHP3Q7Z494 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.27□□□□□ -1.73
NPHP3Q7Z494 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NPHP3Q7Z494 RPL21P18-201ENST00000469899 480 ntBASIC4.27□□□□□ -1.73
NPHP3Q7Z494 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.27□□□□□ -1.73
NPHP3Q7Z494 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.27□□□□□ -1.73
NPHP3Q7Z494 RN7SKP132-201ENST00000516001 208 ntBASIC4.27□□□□□ -1.73
NPHP3Q7Z494 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.27□□□□□ -1.73
NPHP3Q7Z494 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.27□□□□□ -1.73
NPHP3Q7Z494 AC139103.1-201ENST00000534696 1030 ntBASIC4.27□□□□□ -1.73
NPHP3Q7Z494 MIR4435-1-201ENST00000582552 80 ntBASIC4.27□□□□□ -1.73
NPHP3Q7Z494 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.27□□□□□ -1.73
NPHP3Q7Z494 ATP1B3P1-201ENST00000605365 821 ntBASIC4.27□□□□□ -1.73
NPHP3Q7Z494 AC078880.5-201ENST00000617845 421 ntBASIC4.27□□□□□ -1.73
NPHP3Q7Z494 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.27□□□□□ -1.73
NPHP3Q7Z494 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NPHP3Q7Z494 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NPHP3Q7Z494 AC139713.2-210ENST00000641741 992 ntBASIC4.27□□□□□ -1.73
NPHP3Q7Z494 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.27□□□□□ -1.73
NPHP3Q7Z494 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NPHP3Q7Z494 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NPHP3Q7Z494 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NPHP3Q7Z494 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NPHP3Q7Z494 HMGB3P31-201ENST00000413333 595 ntBASIC4.26□□□□□ -1.73
NPHP3Q7Z494 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.26□□□□□ -1.73
NPHP3Q7Z494 AL354692.1-201ENST00000423044 315 ntBASIC4.26□□□□□ -1.73
NPHP3Q7Z494 RPL23AP82-202ENST00000427528 469 ntBASIC4.26□□□□□ -1.73
NPHP3Q7Z494 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.26□□□□□ -1.73
NPHP3Q7Z494 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.26□□□□□ -1.73
NPHP3Q7Z494 CENPBD1P1-201ENST00000464061 469 ntBASIC4.26□□□□□ -1.73
NPHP3Q7Z494 RPS4XP13-201ENST00000483219 789 ntBASIC4.26□□□□□ -1.73
NPHP3Q7Z494 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NPHP3Q7Z494 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.26□□□□□ -1.73
NPHP3Q7Z494 RN7SKP82-201ENST00000516786 223 ntBASIC4.26□□□□□ -1.73
NPHP3Q7Z494 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.26□□□□□ -1.73
NPHP3Q7Z494 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.26□□□□□ -1.73
NPHP3Q7Z494 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NPHP3Q7Z494 AC090666.1-201ENST00000578241 445 ntBASIC4.26□□□□□ -1.73
NPHP3Q7Z494 AC006116.7-201ENST00000590141 756 ntBASIC4.26□□□□□ -1.73
NPHP3Q7Z494 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.26□□□□□ -1.73
NPHP3Q7Z494 AL139286.1-201ENST00000604465 483 ntBASIC4.26□□□□□ -1.73
NPHP3Q7Z494 AC018645.2-201ENST00000609151 472 ntBASIC4.26□□□□□ -1.73
NPHP3Q7Z494 AC009269.6-201ENST00000621778 588 ntBASIC4.26□□□□□ -1.73
NPHP3Q7Z494 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NPHP3Q7Z494 AL139811.1-201ENST00000424779 2299 ntBASIC4.26□□□□□ -1.73
NPHP3Q7Z494 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 RNA5SP27-201ENST00000363839 119 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 RPS4XP8-201ENST00000402039 771 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 MIR1261-201ENST00000408659 82 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AL356968.1-201ENST00000416622 474 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AC013262.1-201ENST00000426710 252 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AC022018.1-201ENST00000430685 241 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 FCF1P3-201ENST00000496394 590 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AC008565.1-201ENST00000509046 885 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 RPL7L1P13-201ENST00000511702 739 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AC017037.2-201ENST00000513850 890 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 RN7SKP272-201ENST00000516988 232 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AC010306.1-201ENST00000523223 1117 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 PTP4A1P6-201ENST00000531034 478 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 RN7SL622P-201ENST00000585292 275 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AC009948.4-201ENST00000604692 675 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AL392112.1-201ENST00000605115 829 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AC005156.1-201ENST00000613371 573 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 STMN1P1-201ENST00000617809 440 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AC022306.3-201ENST00000619930 550 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AC024595.1-201ENST00000623088 387 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 AL590396.2-201ENST00000636511 1041 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.25□□□□□ -1.73
NPHP3Q7Z494 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPHP3Q7Z494 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.24□□□□□ -1.73
NPHP3Q7Z494 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPHP3Q7Z494 RNU6-543P-201ENST00000362576 108 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.24□□□□□ -1.73
NPHP3Q7Z494 MIR620-201ENST00000385232 95 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 PRELID3BP11-201ENST00000414230 479 ntBASIC4.24□□□□□ -1.73
NPHP3Q7Z494 RPS12P23-201ENST00000419579 400 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms