Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 YWHAZP8-201ENST00000436935 731 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC104332.1-201ENST00000440471 797 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AL161636.2-201ENST00000445179 927 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 HMGB3P30-201ENST00000457863 606 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 PABPC1P3-201ENST00000469174 459 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 RPS26P24-201ENST00000497656 331 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 KHDC1P1-201ENST00000511053 508 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 RN7SKP288-201ENST00000516227 268 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 Y_RNA.708-201ENST00000516950 96 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 RNU6-255P-201ENST00000516957 105 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 RN7SKP92-201ENST00000517266 244 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 IGKV2-36-201ENST00000519999 223 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 IGHV4-55-201ENST00000520889 368 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC112191.2-201ENST00000522428 333 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 OR4P1P-201ENST00000530808 1136 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC135001.1-201ENST00000544546 283 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC007956.1-201ENST00000555623 542 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AL353997.4-201ENST00000586196 166 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC104687.2-201ENST00000604442 342 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC245014.3-201ENST00000618589 347 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC103858.2-201ENST00000621471 543 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC011155.2-201ENST00000623202 216 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC091925.2-201ENST00000625059 256 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AL159972.1-201ENST00000625150 448 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC104964.3-201ENST00000606115 2860 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AC235565.1-201ENST00000456962 1325 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AC112255.1-201ENST00000624070 2493 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 RNA5SP477-201ENST00000362639 119 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 RNU6-1159P-201ENST00000362933 107 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 RNU6-593P-201ENST00000364716 112 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 RNU6-806P-201ENST00000365147 105 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 RNU2-23P-201ENST00000410545 195 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AP000275.1-201ENST00000411943 390 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AC243428.1-201ENST00000421099 264 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 MRPS18CP6-201ENST00000423587 223 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AC130360.1-201ENST00000425489 1117 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AC073069.1-201ENST00000428657 441 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 RPL21P133-201ENST00000443666 476 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AL031584.1-201ENST00000447169 754 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AC105399.1-202ENST00000447303 205 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AC112492.4-201ENST00000456549 352 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 RPL23AP72-201ENST00000492447 435 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AC116337.1-201ENST00000509680 687 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 RNA5SP384-201ENST00000516615 116 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 IGKV2D-23-201ENST00000518179 286 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AC130365.2-201ENST00000525882 1201 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AP003385.6-201ENST00000531603 374 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AP001823.1-201ENST00000604056 1003 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 HMGB1P50-201ENST00000605814 607 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AL133481.2-203ENST00000607558 139 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 AC133644.2-201ENST00000608142 540 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.01□□□□□ -1.45
FOXR1Q6PIV2 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms