Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 AC008521.1-201ENST00000587471 187 ntBASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 AL138889.2-201ENST00000603883 242 ntBASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 AC024255.1-201ENST00000614376 102 ntBASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 AL365222.1-201ENST00000614661 98 ntBASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 AC022325.1-201ENST00000502748 2199 ntBASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNFT1Q5M7Z0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 SMG1P7-201ENST00000565246 2704 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 OR52B3P-201ENST00000314715 928 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 Y_RNA.43-201ENST00000362670 111 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 RNA5SP435-201ENST00000364044 108 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 RNU6-188P-201ENST00000364207 107 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 RNA5SP478-201ENST00000364657 115 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 RBMY1HP-201ENST00000382759 1389 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 Y_RNA.398-201ENST00000383952 99 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 RNU6-44P-201ENST00000384045 107 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AC010154.1-201ENST00000425857 269 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AC092967.1-201ENST00000449016 481 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 VPS25P1-201ENST00000455691 508 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 RANP2-201ENST00000456833 229 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 RNU7-187P-201ENST00000458985 68 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AC012123.2-201ENST00000485809 248 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 RPS24P16-201ENST00000497294 392 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 RPL7P47-201ENST00000497299 556 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 BIN2P1-201ENST00000504996 1530 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AC092436.3-201ENST00000511788 257 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 Y_RNA.667-201ENST00000516212 107 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 CYCSP22-201ENST00000517555 339 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 SOD1P3-201ENST00000518682 454 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AC073916.1-201ENST00000545095 130 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AC025423.5-201ENST00000550230 219 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 LSM6P2-201ENST00000552208 177 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 SULT1C2P2-201ENST00000562517 294 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 MIR5095-201ENST00000578844 88 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AL078605.1-201ENST00000603529 500 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AC105235.1-201ENST00000623208 1816 ntBASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNFT1Q5M7Z0 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 AC005225.5-201ENST00000623547 2225 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms