Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 RPL23AP16-201ENST00000441715 421 ntBASIC4.43□□□□□ -1.7
CCDC96Q2M329 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 RAB9AP1-201ENST00000449393 573 ntBASIC4.43□□□□□ -1.7
CCDC96Q2M329 AC104073.1-201ENST00000451988 151 ntBASIC4.43□□□□□ -1.7
CCDC96Q2M329 PTGES3P5-201ENST00000455109 434 ntBASIC4.43□□□□□ -1.7
CCDC96Q2M329 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 AC091860.1-201ENST00000505723 432 ntBASIC4.43□□□□□ -1.7
CCDC96Q2M329 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 DEFB130C-202ENST00000530001 230 ntBASIC4.43□□□□□ -1.7
CCDC96Q2M329 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 AC093519.1-201ENST00000566109 298 ntBASIC4.43□□□□□ -1.7
CCDC96Q2M329 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 MIR3690-201ENST00000580266 75 ntBASIC4.43□□□□□ -1.7
CCDC96Q2M329 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 AL034351.1-201ENST00000605288 668 ntBASIC4.43□□□□□ -1.7
CCDC96Q2M329 AL590282.1-201ENST00000610379 1136 ntBASIC4.43□□□□□ -1.7
CCDC96Q2M329 VN1R7P-201ENST00000619242 903 ntBASIC4.43□□□□□ -1.7
CCDC96Q2M329 AC019226.2-201ENST00000625973 424 ntBASIC4.43□□□□□ -1.7
CCDC96Q2M329 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC96Q2M329 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC96Q2M329 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC96Q2M329 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC96Q2M329 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC96Q2M329 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC96Q2M329 RNU6-263P-201ENST00000363811 107 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC96Q2M329 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC96Q2M329 MTND4P13-201ENST00000402078 1023 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 AL136310.1-201ENST00000404926 654 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 AL139098.1-201ENST00000407291 389 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 AC107081.1-201ENST00000414975 361 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 RPS3AP37-201ENST00000419176 745 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 AL389915.1-201ENST00000422463 466 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 C1DP1-201ENST00000426049 402 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC96Q2M329 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC96Q2M329 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC96Q2M329 AC087650.1-201ENST00000431445 468 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 AC084290.1-201ENST00000434995 374 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 HMGN2P20-201ENST00000437531 273 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC96Q2M329 SETD6P1-201ENST00000444575 317 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 MTCYBP42-201ENST00000444653 1130 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC96Q2M329 AL589880.1-201ENST00000448271 287 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC96Q2M329 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC96Q2M329 MTCO3P2-201ENST00000457365 171 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 AL133162.1-201ENST00000463228 453 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 AC079203.1-201ENST00000487972 404 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 AC069499.1-201ENST00000489433 509 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 RPL23AP55-201ENST00000498163 452 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 OR5H5P-201ENST00000503164 928 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 HMGN1P11-201ENST00000508668 303 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC96Q2M329 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC96Q2M329 MTCO3P44-201ENST00000510977 541 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 RNA5SP208-201ENST00000516156 78 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 RNA5SP164-201ENST00000516533 110 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 MRPS36P3-201ENST00000519284 130 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC96Q2M329 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC96Q2M329 AC007991.1-201ENST00000522680 631 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 AC023538.1-201ENST00000534576 736 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 AC074050.1-201ENST00000563247 211 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CCDC96Q2M329 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC96Q2M329 AL355493.4-201ENST00000618530 292 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 AC073968.1-201ENST00000618594 637 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC96Q2M329 OR8B1P-202ENST00000641132 1178 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC96Q2M329 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
CCDC96Q2M329 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.42□□□□□ -1.7
CCDC96Q2M329 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CCDC96Q2M329 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC96Q2M329 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC96Q2M329 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC96Q2M329 AC111188.2-201ENST00000529697 1387 ntBASIC4.41□□□□□ -1.7
CCDC96Q2M329 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC96Q2M329 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC96Q2M329 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC96Q2M329 AC004925.1-201ENST00000624256 2706 ntBASIC4.41□□□□□ -1.7
CCDC96Q2M329 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC96Q2M329 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC96Q2M329 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC96Q2M329 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms