Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SEC61A1P61619 AL592148.3-201ENST00000608771 2646 ntBASIC3.84□□□□□ -1.8
SEC61A1P61619 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.84□□□□□ -1.8
SEC61A1P61619 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A1P61619 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SEC61A1P61619 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.83□□□□□ -1.8
SEC61A1P61619 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A1P61619 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A1P61619 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A1P61619 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.83□□□□□ -1.8
SEC61A1P61619 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.83□□□□□ -1.8
SEC61A1P61619 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.83□□□□□ -1.8
SEC61A1P61619 RNY4P24-201ENST00000362735 96 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 Y_RNA.97-201ENST00000363094 102 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 RNU6-297P-201ENST00000384636 107 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.83□□□□□ -1.8
SEC61A1P61619 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.83□□□□□ -1.8
SEC61A1P61619 RPL7P30-201ENST00000420888 709 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 MRPS10P2-201ENST00000431226 381 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 AC091862.1-201ENST00000438016 1100 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 MTND6P18-201ENST00000439477 513 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A1P61619 VN1R10P-201ENST00000447106 875 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.83□□□□□ -1.8
SEC61A1P61619 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A1P61619 RPL7P31-201ENST00000450192 724 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.83□□□□□ -1.8
SEC61A1P61619 AC079804.1-201ENST00000461922 436 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 AC097493.1-201ENST00000463958 372 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 AC087385.1-201ENST00000475062 312 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 CEACAMP10-202ENST00000495431 496 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 AC146944.2-203ENST00000502493 354 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A1P61619 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.83□□□□□ -1.8
SEC61A1P61619 AC026412.2-201ENST00000512270 1075 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 AC139495.1-202ENST00000513164 354 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 IGLVIV-53-201ENST00000520107 367 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.83□□□□□ -1.8
SEC61A1P61619 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.83□□□□□ -1.8
SEC61A1P61619 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SEC61A1P61619 AC013828.2-201ENST00000532487 235 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
SEC61A1P61619 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SEC61A1P61619 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.83□□□□□ -1.8
SEC61A1P61619 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SEC61A1P61619 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.83□□□□□ -1.8
SEC61A1P61619 AL389895.1-201ENST00000554127 252 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.83□□□□□ -1.8
SEC61A1P61619 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.83□□□□□ -1.8
SEC61A1P61619 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.83□□□□□ -1.8
SEC61A1P61619 AC103792.1-201ENST00000603591 919 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.83□□□□□ -1.8
SEC61A1P61619 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.83□□□□□ -1.8
SEC61A1P61619 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 MIR6798-201ENST00000612887 67 ntBASIC3.83□□□□□ -1.8
SEC61A1P61619 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A1P61619 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.83□□□□□ -1.8
SEC61A1P61619 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SEC61A1P61619 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A1P61619 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.83□□□□□ -1.8
SEC61A1P61619 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.83□□□□□ -1.8
SEC61A1P61619 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEC61A1P61619 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.82□□□□□ -1.8
SEC61A1P61619 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SEC61A1P61619 RNU6-462P-201ENST00000362659 105 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 RNU5E-5P-201ENST00000365379 116 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.82□□□□□ -1.8
SEC61A1P61619 RNU6-259P-201ENST00000383999 107 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 MIR649-201ENST00000384843 97 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 MIR506-201ENST00000384998 124 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 U8.14-201ENST00000390843 143 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 RN7SKP56-201ENST00000410513 331 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 RPL21P32-201ENST00000419877 477 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.82□□□□□ -1.8
SEC61A1P61619 RPL18P10-201ENST00000425606 538 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SEC61A1P61619 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.82□□□□□ -1.8
SEC61A1P61619 LSM1P1-201ENST00000438629 273 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 RPL23AP93-201ENST00000440847 484 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.82□□□□□ -1.8
SEC61A1P61619 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.82□□□□□ -1.8
SEC61A1P61619 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.82□□□□□ -1.8
SEC61A1P61619 RPL39P6-201ENST00000448289 150 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 HMGN3P1-201ENST00000453847 193 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 ISCUP1-201ENST00000454451 448 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 AC091564.1-201ENST00000464563 479 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 KLF3P2-201ENST00000465138 268 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 AL136126.1-201ENST00000473603 402 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 AP000893.1-201ENST00000474462 794 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 AC017015.1-201ENST00000477387 286 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.82□□□□□ -1.8
SEC61A1P61619 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.82□□□□□ -1.8
SEC61A1P61619 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.82□□□□□ -1.8
SEC61A1P61619 AC006499.2-201ENST00000513470 337 ntBASIC3.82□□□□□ -1.8
SEC61A1P61619 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.82□□□□□ -1.8
SEC61A1P61619 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.82□□□□□ -1.8
SEC61A1P61619 CCNG2P1-201ENST00000549521 1000 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms