Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.41□□□□□ -1.7
CLRN1P58418 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CLRN1P58418 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLRN1P58418 AC114546.3-201ENST00000623582 1734 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 MAPK10-320ENST00000641462 6696 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLRN1P58418 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.41□□□□□ -1.7
CLRN1P58418 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLRN1P58418 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLRN1P58418 RNU6-1120P-201ENST00000362988 108 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CLRN1P58418 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CLRN1P58418 AC013442.1-201ENST00000397347 228 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 RPL7P60-201ENST00000397636 735 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.41□□□□□ -1.7
CLRN1P58418 RNU2-9P-201ENST00000410194 145 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 RN7SKP229-201ENST00000410465 302 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 RPL31P2-201ENST00000413849 377 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 AL807761.1-201ENST00000417622 171 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 SEPT14P3-201ENST00000439401 183 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 BNIP3P2-201ENST00000441221 577 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 RPL34P20-201ENST00000442771 351 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.41□□□□□ -1.7
CLRN1P58418 AL163193.1-201ENST00000444895 788 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLRN1P58418 AL732372.2-207ENST00000445840 183 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.41□□□□□ -1.7
CLRN1P58418 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.41□□□□□ -1.7
CLRN1P58418 SEPT14P2-201ENST00000453405 183 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.41□□□□□ -1.7
CLRN1P58418 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.41□□□□□ -1.7
CLRN1P58418 MTCO2P30-201ENST00000503662 364 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 AK3P4-201ENST00000504283 583 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 AC006499.3-201ENST00000506077 748 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.41□□□□□ -1.7
CLRN1P58418 AC004980.4-201ENST00000513375 203 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 SEPT14P4-201ENST00000513445 186 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 RNA5SP43-201ENST00000516559 110 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 AC090572.1-201ENST00000519251 160 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 RPL23AP53-201ENST00000521854 457 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 AP006245.2-201ENST00000522004 300 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 FO082796.1-201ENST00000523795 183 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.41□□□□□ -1.7
CLRN1P58418 OR5AN2P-201ENST00000534535 896 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.41□□□□□ -1.7
CLRN1P58418 AC090022.1-201ENST00000546569 311 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.41□□□□□ -1.7
CLRN1P58418 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.41□□□□□ -1.7
CLRN1P58418 TVP23CP2-201ENST00000571473 623 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 MIR3691-201ENST00000578066 90 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 MIR4716-201ENST00000579628 84 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.41□□□□□ -1.7
CLRN1P58418 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.41□□□□□ -1.7
CLRN1P58418 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.41□□□□□ -1.7
CLRN1P58418 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.41□□□□□ -1.7
CLRN1P58418 AC004853.1-201ENST00000604902 698 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 RMST_3.1-201ENST00000611651 109 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.41□□□□□ -1.7
CLRN1P58418 MIR6886-201ENST00000619864 61 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 AC112204.3-201ENST00000623822 332 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 AC024614.3-201ENST00000637860 256 ntBASIC4.41□□□□□ -1.7
CLRN1P58418 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.41□□□□□ -1.7
CLRN1P58418 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLRN1P58418 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CLRN1P58418 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLRN1P58418 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
CLRN1P58418 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLRN1P58418 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLRN1P58418 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CLRN1P58418 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.4□□□□□ -1.7
CLRN1P58418 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.4□□□□□ -1.7
CLRN1P58418 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CLRN1P58418 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CLRN1P58418 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
CLRN1P58418 CKAP2P1-201ENST00000555477 2049 ntBASIC4.4□□□□□ -1.7
CLRN1P58418 STX3-208ENST00000641815 3236 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CLRN1P58418 RNU6-451P-201ENST00000362921 107 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 Y_RNA.279-201ENST00000364763 95 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 RNU6-108P-201ENST00000365558 107 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.4□□□□□ -1.71
CLRN1P58418 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.4□□□□□ -1.71
CLRN1P58418 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.4□□□□□ -1.71
CLRN1P58418 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.4□□□□□ -1.71
CLRN1P58418 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.4□□□□□ -1.71
CLRN1P58418 UQCRBP1-201ENST00000421129 336 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.4□□□□□ -1.71
CLRN1P58418 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.4□□□□□ -1.71
CLRN1P58418 GPR143P-201ENST00000434155 205 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLRN1P58418 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.4□□□□□ -1.71
CLRN1P58418 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.4□□□□□ -1.71
CLRN1P58418 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.4□□□□□ -1.71
CLRN1P58418 AL589765.3-201ENST00000446084 462 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 AC012512.1-201ENST00000446594 718 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 SLC25A18P1-201ENST00000449385 454 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 SNRPGP6-201ENST00000451124 220 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 EIF4A1P11-201ENST00000451239 222 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms