Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH11P55287 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH11P55287 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH11P55287 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH11P55287 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH11P55287 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH11P55287 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.67□□□□□ -1.82
CDH11P55287 AC011260.1-201ENST00000578420 472 ntBASIC3.67□□□□□ -1.82
CDH11P55287 AP005136.1-201ENST00000579765 429 ntBASIC3.67□□□□□ -1.82
CDH11P55287 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH11P55287 AP000811.1-201ENST00000603803 651 ntBASIC3.67□□□□□ -1.82
CDH11P55287 AC010738.1-201ENST00000604970 987 ntBASIC3.67□□□□□ -1.82
CDH11P55287 AC124312.4-201ENST00000605533 310 ntBASIC3.67□□□□□ -1.82
CDH11P55287 RNU4-89P-201ENST00000607443 133 ntBASIC3.67□□□□□ -1.82
CDH11P55287 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH11P55287 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH11P55287 AL591424.2-201ENST00000617023 128 ntBASIC3.67□□□□□ -1.82
CDH11P55287 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH11P55287 AC000123.2-201ENST00000623124 461 ntBASIC3.67□□□□□ -1.82
CDH11P55287 AC026422.1-201ENST00000623961 452 ntBASIC3.67□□□□□ -1.82
CDH11P55287 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH11P55287 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH11P55287 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.67□□□□□ -1.82
CDH11P55287 OR8B1P-202ENST00000641132 1178 ntBASIC3.67□□□□□ -1.82
CDH11P55287 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH11P55287 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH11P55287 OR5BR1P-201ENST00000524992 1330 ntBASIC3.67□□□□□ -1.82
CDH11P55287 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH11P55287 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH11P55287 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH11P55287 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH11P55287 AC007685.1-201ENST00000329806 452 ntBASIC3.66□□□□□ -1.82
CDH11P55287 RNU6-500P-201ENST00000362349 107 ntBASIC3.66□□□□□ -1.82
CDH11P55287 SNRPEP2-201ENST00000397592 279 ntBASIC3.66□□□□□ -1.82
CDH11P55287 MIR1251-201ENST00000408552 70 ntBASIC3.66□□□□□ -1.82
CDH11P55287 SNORA11-201ENST00000408789 128 ntBASIC3.66□□□□□ -1.82
CDH11P55287 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH11P55287 USP9YP33-201ENST00000412220 421 ntBASIC3.66□□□□□ -1.82
CDH11P55287 AC004987.3-201ENST00000413879 771 ntBASIC3.66□□□□□ -1.82
CDH11P55287 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH11P55287 AL953862.1-201ENST00000423016 168 ntBASIC3.66□□□□□ -1.82
CDH11P55287 AL035407.1-201ENST00000429211 571 ntBASIC3.66□□□□□ -1.82
CDH11P55287 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH11P55287 USP9YP35-201ENST00000435696 412 ntBASIC3.66□□□□□ -1.82
CDH11P55287 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH11P55287 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH11P55287 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH11P55287 RPS15AP17-201ENST00000470598 390 ntBASIC3.66□□□□□ -1.82
CDH11P55287 RPL30P6-201ENST00000475925 342 ntBASIC3.66□□□□□ -1.82
CDH11P55287 RN7SL271P-201ENST00000487601 295 ntBASIC3.66□□□□□ -1.82
CDH11P55287 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CDH11P55287 AC068305.1-201ENST00000497406 726 ntBASIC3.66□□□□□ -1.82
CDH11P55287 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.66□□□□□ -1.82
CDH11P55287 RNF138P1-201ENST00000502765 546 ntBASIC3.66□□□□□ -1.82
CDH11P55287 AC005178.1-201ENST00000508392 440 ntBASIC3.66□□□□□ -1.82
CDH11P55287 AC105313.1-201ENST00000509121 353 ntBASIC3.66□□□□□ -1.82
CDH11P55287 AC093281.2-201ENST00000510153 597 ntBASIC3.66□□□□□ -1.82
CDH11P55287 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.66□□□□□ -1.82
CDH11P55287 AC026726.1-201ENST00000512859 601 ntBASIC3.66□□□□□ -1.82
CDH11P55287 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH11P55287 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH11P55287 NARSP2-201ENST00000518524 679 ntBASIC3.66□□□□□ -1.82
CDH11P55287 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.66□□□□□ -1.82
CDH11P55287 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.66□□□□□ -1.82
CDH11P55287 OR4A45P-201ENST00000529954 901 ntBASIC3.66□□□□□ -1.82
CDH11P55287 OR8R1P-201ENST00000543943 764 ntBASIC3.66□□□□□ -1.82
CDH11P55287 LSM6P2-201ENST00000552208 177 ntBASIC3.66□□□□□ -1.82
CDH11P55287 HSPE1P3-201ENST00000559254 309 ntBASIC3.66□□□□□ -1.82
CDH11P55287 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.66□□□□□ -1.82
CDH11P55287 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH11P55287 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH11P55287 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH11P55287 MIR4637-201ENST00000582405 84 ntBASIC3.66□□□□□ -1.82
CDH11P55287 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH11P55287 AC010620.1-201ENST00000601088 1102 ntBASIC3.66□□□□□ -1.82
CDH11P55287 AC006539.2-201ENST00000601729 572 ntBASIC3.66□□□□□ -1.82
CDH11P55287 AC243773.3-201ENST00000613270 256 ntBASIC3.66□□□□□ -1.82
CDH11P55287 AL354976.1-201ENST00000613843 387 ntBASIC3.66□□□□□ -1.82
CDH11P55287 AC122133.1-201ENST00000613964 233 ntBASIC3.66□□□□□ -1.82
CDH11P55287 AC112484.5-201ENST00000624189 228 ntBASIC3.66□□□□□ -1.82
CDH11P55287 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH11P55287 OR4G11P-202ENST00000642116 1414 ntBASIC3.66□□□□□ -1.82
CDH11P55287 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH11P55287 FAM35DP-201ENST00000323387 2712 ntBASIC3.66□□□□□ -1.82
CDH11P55287 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH11P55287 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CDH11P55287 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH11P55287 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH11P55287 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CDH11P55287 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH11P55287 AL079343.1-201ENST00000572358 1771 ntBASIC3.66□□□□□ -1.82
CDH11P55287 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH11P55287 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.82
CDH11P55287 AC010733.2-201ENST00000589496 5702 ntBASIC3.65□□□□□ -1.82
CDH11P55287 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.65□□□□□ -1.82
CDH11P55287 NCAPGP1-201ENST00000505112 1814 ntBASIC3.65□□□□□ -1.82
CDH11P55287 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.65□□□□□ -1.82
CDH11P55287 AC106871.1-201ENST00000568324 3102 ntBASIC3.65□□□□□ -1.82
CDH11P55287 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.65□□□□□ -1.82
CDH11P55287 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms