Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.75□□□□□ -1.81
PDX1P52945 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.75□□□□□ -1.81
PDX1P52945 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PDX1P52945 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.75□□□□□ -1.81
PDX1P52945 AC008127.2-201ENST00000549925 1075 ntBASIC3.75□□□□□ -1.81
PDX1P52945 GNRHR2P1-201ENST00000555315 631 ntBASIC3.75□□□□□ -1.81
PDX1P52945 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.75□□□□□ -1.81
PDX1P52945 AC022968.1-201ENST00000567372 442 ntBASIC3.75□□□□□ -1.81
PDX1P52945 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.75□□□□□ -1.81
PDX1P52945 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PDX1P52945 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.75□□□□□ -1.81
PDX1P52945 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.75□□□□□ -1.81
PDX1P52945 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.75□□□□□ -1.81
PDX1P52945 SRGNP1-201ENST00000603392 451 ntBASIC3.75□□□□□ -1.81
PDX1P52945 AC019176.2-201ENST00000611579 315 ntBASIC3.75□□□□□ -1.81
PDX1P52945 AC015967.1-201ENST00000619893 476 ntBASIC3.75□□□□□ -1.81
PDX1P52945 AC022079.1-201ENST00000621546 602 ntBASIC3.75□□□□□ -1.81
PDX1P52945 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.75□□□□□ -1.81
PDX1P52945 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.75□□□□□ -1.81
PDX1P52945 MTND5P24-201ENST00000438892 1767 ntBASIC3.75□□□□□ -1.81
PDX1P52945 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PDX1P52945 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDX1P52945 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.75□□□□□ -1.81
PDX1P52945 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDX1P52945 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.75□□□□□ -1.81
PDX1P52945 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.74□□□□□ -1.81
PDX1P52945 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.74□□□□□ -1.81
PDX1P52945 AP002001.2-201ENST00000529025 1469 ntBASIC3.74□□□□□ -1.81
PDX1P52945 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.74□□□□□ -1.81
PDX1P52945 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.74□□□□□ -1.81
PDX1P52945 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDX1P52945 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDX1P52945 RNA5SP97-201ENST00000365006 84 ntBASIC3.74□□□□□ -1.81
PDX1P52945 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.74□□□□□ -1.81
PDX1P52945 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDX1P52945 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.74□□□□□ -1.81
PDX1P52945 SNORA51.6-201ENST00000384151 125 ntBASIC3.74□□□□□ -1.81
PDX1P52945 MIR183-201ENST00000384958 110 ntBASIC3.74□□□□□ -1.81
PDX1P52945 RPL23AP48-201ENST00000406913 488 ntBASIC3.74□□□□□ -1.81
PDX1P52945 SNORA3.3-201ENST00000408712 125 ntBASIC3.74□□□□□ -1.81
PDX1P52945 AL035410.1-201ENST00000427409 427 ntBASIC3.74□□□□□ -1.81
PDX1P52945 AL591419.1-201ENST00000427423 339 ntBASIC3.74□□□□□ -1.81
PDX1P52945 AC011742.1-201ENST00000431448 434 ntBASIC3.74□□□□□ -1.81
PDX1P52945 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.74□□□□□ -1.81
PDX1P52945 Z74696.2-201ENST00000436514 498 ntBASIC3.74□□□□□ -1.81
PDX1P52945 AC083863.1-201ENST00000438811 231 ntBASIC3.74□□□□□ -1.81
PDX1P52945 PDSS1P2-201ENST00000449397 678 ntBASIC3.74□□□□□ -1.81
PDX1P52945 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.74□□□□□ -1.81
PDX1P52945 TRBV26-201ENST00000456572 344 ntBASIC3.74□□□□□ -1.81
PDX1P52945 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.74□□□□□ -1.81
PDX1P52945 KLRA1P-201ENST00000503499 986 ntBASIC3.74□□□□□ -1.81
PDX1P52945 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.74□□□□□ -1.81
PDX1P52945 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.74□□□□□ -1.81
PDX1P52945 DUXAP2-201ENST00000519198 589 ntBASIC3.74□□□□□ -1.81
PDX1P52945 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.74□□□□□ -1.81
PDX1P52945 IGLVIV-53-201ENST00000520107 367 ntBASIC3.74□□□□□ -1.81
PDX1P52945 MTND2P38-201ENST00000522536 667 ntBASIC3.74□□□□□ -1.81
PDX1P52945 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.74□□□□□ -1.81
PDX1P52945 OR4A12P-201ENST00000530847 918 ntBASIC3.74□□□□□ -1.81
PDX1P52945 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.74□□□□□ -1.81
PDX1P52945 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.74□□□□□ -1.81
PDX1P52945 AC092470.1-201ENST00000546187 132 ntBASIC3.74□□□□□ -1.81
PDX1P52945 LSM6P2-201ENST00000552208 177 ntBASIC3.74□□□□□ -1.81
PDX1P52945 AL133457.1-201ENST00000564251 987 ntBASIC3.74□□□□□ -1.81
PDX1P52945 AL512347.1-201ENST00000566420 503 ntBASIC3.74□□□□□ -1.81
PDX1P52945 VN1R82P-201ENST00000601481 356 ntBASIC3.74□□□□□ -1.81
PDX1P52945 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.74□□□□□ -1.81
PDX1P52945 DPRXP5-201ENST00000604662 539 ntBASIC3.74□□□□□ -1.81
PDX1P52945 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.74□□□□□ -1.81
PDX1P52945 AL391497.1-201ENST00000608671 547 ntBASIC3.74□□□□□ -1.81
PDX1P52945 AC128687.2-201ENST00000609657 566 ntBASIC3.74□□□□□ -1.81
PDX1P52945 AC245297.2-201ENST00000610119 565 ntBASIC3.74□□□□□ -1.81
PDX1P52945 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.74□□□□□ -1.81
PDX1P52945 Z99129.2-201ENST00000619967 314 ntBASIC3.74□□□□□ -1.81
PDX1P52945 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDX1P52945 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDX1P52945 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDX1P52945 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDX1P52945 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.74□□□□□ -1.81
PDX1P52945 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
PDX1P52945 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.73□□□□□ -1.81
PDX1P52945 AC005539.1-201ENST00000443768 1479 ntBASIC3.73□□□□□ -1.81
PDX1P52945 ZNF542P-204ENST00000482727 1305 ntBASIC3.73□□□□□ -1.81
PDX1P52945 SGO1P2-201ENST00000429458 1589 ntBASIC3.73□□□□□ -1.81
PDX1P52945 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PDX1P52945 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDX1P52945 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.73□□□□□ -1.81
PDX1P52945 AC016769.3-201ENST00000396562 315 ntBASIC3.73□□□□□ -1.81
PDX1P52945 ARF4P3-201ENST00000397387 509 ntBASIC3.73□□□□□ -1.81
PDX1P52945 EIF5P1-201ENST00000400019 1231 ntBASIC3.73□□□□□ -1.81
PDX1P52945 MIR1284-201ENST00000408337 120 ntBASIC3.73□□□□□ -1.81
PDX1P52945 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.73□□□□□ -1.81
PDX1P52945 AL133384.1-201ENST00000412744 351 ntBASIC3.73□□□□□ -1.81
PDX1P52945 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.73□□□□□ -1.81
PDX1P52945 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.73□□□□□ -1.81
PDX1P52945 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.73□□□□□ -1.81
PDX1P52945 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.73□□□□□ -1.81
PDX1P52945 TIMM9P2-201ENST00000419324 266 ntBASIC3.73□□□□□ -1.81
PDX1P52945 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.73□□□□□ -1.81
PDX1P52945 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms