Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC1A1P43005 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SLC1A1P43005 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SLC1A1P43005 AL589826.1-201ENST00000340697 249 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 RNU6-335P-201ENST00000364563 113 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SLC1A1P43005 MIR449B-201ENST00000384995 97 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC1A1P43005 AL357078.2-201ENST00000416486 427 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 TOMM22P1-201ENST00000418578 312 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC1A1P43005 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC1A1P43005 AC010881.1-201ENST00000433830 235 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC1A1P43005 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 RN7SL20P-201ENST00000488827 297 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 HMGB1P38-201ENST00000490557 577 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SLC1A1P43005 IGKV2D-36-201ENST00000518643 226 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC1A1P43005 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC1A1P43005 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC1A1P43005 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC1A1P43005 ZNF92P2-201ENST00000600543 1059 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 PRELID3BP8-201ENST00000604148 295 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 BNIP3P4-201ENST00000604946 565 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 AL109618.2-201ENST00000605527 211 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 AC021851.1-201ENST00000608537 1082 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC1A1P43005 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC1A1P43005 AL161637.1-201ENST00000622380 412 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC1A1P43005 AL035425.3-201ENST00000564206 4996 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 AC008264.2-201ENST00000610193 3731 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 AL353743.1-202ENST00000431724 1695 ntBASIC3.23□□□□□ -1.89
SLC1A1P43005 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SLC1A1P43005 AC110774.1-201ENST00000623567 2018 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
SLC1A1P43005 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SLC1A1P43005 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SLC1A1P43005 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SLC1A1P43005 SNORD56.4-201ENST00000363883 71 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 RNU6-650P-201ENST00000365658 111 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SLC1A1P43005 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SLC1A1P43005 AL138880.1-201ENST00000405824 642 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC1A1P43005 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SLC1A1P43005 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC1A1P43005 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC1A1P43005 RPL7P46-201ENST00000425129 740 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 AC073508.1-201ENST00000428866 656 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC1A1P43005 MTCO1P43-201ENST00000431831 488 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 AL050321.1-201ENST00000432363 400 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC1A1P43005 Z75741.1-201ENST00000446793 314 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 RPL7P59-201ENST00000447700 943 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 MTND2P30-201ENST00000456663 382 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 RN7SL863P-201ENST00000462370 296 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 FAM133DP-201ENST00000464802 691 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 AL672167.3-201ENST00000465951 960 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 RN7SL633P-201ENST00000488974 297 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC1A1P43005 HMGB3P15-201ENST00000507326 574 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 RNU6-1102P-201ENST00000516149 96 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC1A1P43005 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC1A1P43005 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC1A1P43005 CR383656.14-201ENST00000551951 406 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC1A1P43005 AC095057.3-201ENST00000567102 1157 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC1A1P43005 VN1R88P-201ENST00000596787 292 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC1A1P43005 IGHV3-29-201ENST00000604817 344 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 AC112503.2-201ENST00000609005 552 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC1A1P43005 AL354696.1-201ENST00000614652 497 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC1A1P43005 AC006213.5-201ENST00000619673 288 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 AC015967.1-201ENST00000619893 476 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SLC1A1P43005 AC099506.2-201ENST00000623074 221 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 AP006248.3-201ENST00000623580 594 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 AC018692.3-201ENST00000623929 123 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 AC092184.1-201ENST00000625042 715 ntBASIC3.22□□□□□ -1.89
SLC1A1P43005 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SLC1A1P43005 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SLC1A1P43005 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SLC1A1P43005 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.21□□□□□ -1.9
SLC1A1P43005 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC1A1P43005 MTCO1P12-201ENST00000414273 1543 ntBASIC3.21□□□□□ -1.9
SLC1A1P43005 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SLC1A1P43005 RNU6-374P-201ENST00000364146 108 ntBASIC3.21□□□□□ -1.9
SLC1A1P43005 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC1A1P43005 MIR183-201ENST00000384958 110 ntBASIC3.21□□□□□ -1.9
SLC1A1P43005 MIR525-201ENST00000384978 85 ntBASIC3.21□□□□□ -1.9
SLC1A1P43005 U3.19-201ENST00000390893 196 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms