Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 BOLA3P4-201ENST00000418151 400 ntBASIC3.24□□□□□ -1.89
TNFSF9P41273 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFSF9P41273 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.24□□□□□ -1.89
TNFSF9P41273 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFSF9P41273 DNAJC19P8-201ENST00000452887 259 ntBASIC3.24□□□□□ -1.89
TNFSF9P41273 AL035407.2-201ENST00000454090 378 ntBASIC3.24□□□□□ -1.89
TNFSF9P41273 CFTRP1-201ENST00000456646 183 ntBASIC3.24□□□□□ -1.89
TNFSF9P41273 AC096576.1-201ENST00000489014 359 ntBASIC3.24□□□□□ -1.89
TNFSF9P41273 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.24□□□□□ -1.89
TNFSF9P41273 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.24□□□□□ -1.89
TNFSF9P41273 AC024224.1-201ENST00000538284 609 ntBASIC3.24□□□□□ -1.89
TNFSF9P41273 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFSF9P41273 EIF5A2P1-201ENST00000564027 460 ntBASIC3.24□□□□□ -1.89
TNFSF9P41273 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFSF9P41273 AC007566.2-201ENST00000603642 413 ntBASIC3.24□□□□□ -1.89
TNFSF9P41273 AC012531.5-201ENST00000611375 151 ntBASIC3.24□□□□□ -1.89
TNFSF9P41273 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TNFSF9P41273 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TNFSF9P41273 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TNFSF9P41273 SEC63P2-201ENST00000503863 1939 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 RNU6-1339P-201ENST00000363574 91 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 SNORA46-201ENST00000384762 135 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 ATF1P1-201ENST00000406040 927 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFSF9P41273 MIR1250-201ENST00000408098 113 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 RNU6-272P-201ENST00000411028 104 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 AC069218.2-201ENST00000411665 344 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFSF9P41273 ZFAND6P1-201ENST00000434138 605 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 RPL23AP22-201ENST00000437556 453 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 MTND5P28-201ENST00000438005 1594 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 AC108729.2-201ENST00000476543 840 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.23□□□□□ -1.89
TNFSF9P41273 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.23□□□□□ -1.89
TNFSF9P41273 RPL23AP55-201ENST00000498163 452 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 PRELID3BP6-201ENST00000503839 571 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
TNFSF9P41273 AC104108.1-201ENST00000509930 412 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.23□□□□□ -1.89
TNFSF9P41273 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.23□□□□□ -1.89
TNFSF9P41273 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.23□□□□□ -1.89
TNFSF9P41273 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFSF9P41273 H3F3AP1-201ENST00000559984 334 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 AGGF1P8-201ENST00000562979 1000 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 MTCYBP28-201ENST00000566728 1132 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.23□□□□□ -1.89
TNFSF9P41273 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFSF9P41273 AC012254.4-201ENST00000588843 273 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFSF9P41273 AC015871.2-201ENST00000603605 948 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 AC005156.1-201ENST00000613371 573 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFSF9P41273 AL109659.3-201ENST00000624985 950 ntBASIC3.23□□□□□ -1.89
TNFSF9P41273 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
TNFSF9P41273 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.22□□□□□ -1.89
TNFSF9P41273 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
TNFSF9P41273 MTND5P11-201ENST00000511037 1812 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 SNORD6-201ENST00000365444 73 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 MIR607-201ENST00000385241 96 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
TNFSF9P41273 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 EI24P1-201ENST00000416584 867 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 MTCYBP24-201ENST00000420387 1106 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 DUTP6-201ENST00000425573 462 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 AL139132.1-201ENST00000431587 344 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 MTCO1P43-201ENST00000431831 488 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 AC025750.2-201ENST00000442609 450 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFSF9P41273 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 AC140076.1-201ENST00000449897 361 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 Z99714.1-201ENST00000450463 807 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.22□□□□□ -1.89
TNFSF9P41273 AC010468.1-201ENST00000461022 817 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.22□□□□□ -1.89
TNFSF9P41273 AC025181.1-201ENST00000477507 416 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFSF9P41273 HMGB3P15-201ENST00000507326 574 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.22□□□□□ -1.89
TNFSF9P41273 USP9YP5-201ENST00000511770 630 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.22□□□□□ -1.89
TNFSF9P41273 RNU6-202P-201ENST00000515998 96 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 RN7SKP244-201ENST00000516513 307 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFSF9P41273 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFSF9P41273 AF279873.1-201ENST00000523393 313 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFSF9P41273 OR5G4P-201ENST00000525251 760 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 MTCYBP41-201ENST00000528913 1123 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 MTND5P21-201ENST00000531961 522 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFSF9P41273 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.22□□□□□ -1.89
TNFSF9P41273 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFSF9P41273 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
TNFSF9P41273 OR4G1P-201ENST00000588632 938 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.22□□□□□ -1.89
TNFSF9P41273 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.22□□□□□ -1.89
TNFSF9P41273 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.22□□□□□ -1.89
TNFSF9P41273 AL137790.1-201ENST00000634283 177 ntBASIC3.22□□□□□ -1.89
TNFSF9P41273 AL592494.2-201ENST00000425455 1548 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms