Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AL392112.1-201ENST00000605115 829 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.26□□□□□ -1.89
SCN4AP35499 AL135786.2-201ENST00000608422 615 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 AC004241.3-201ENST00000611728 517 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 AC092608.2-201ENST00000624427 218 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.26□□□□□ -1.89
SCN4AP35499 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.26□□□□□ -1.89
SCN4AP35499 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.26□□□□□ -1.89
SCN4AP35499 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SCN4AP35499 MIR1289-2-201ENST00000408360 111 ntBASIC3.25□□□□□ -1.89
SCN4AP35499 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SCN4AP35499 RNA5SP274-201ENST00000410484 108 ntBASIC3.25□□□□□ -1.89
SCN4AP35499 AC006960.1-201ENST00000419980 153 ntBASIC3.25□□□□□ -1.89
SCN4AP35499 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.25□□□□□ -1.89
SCN4AP35499 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.25□□□□□ -1.89
SCN4AP35499 UQCRHP3-201ENST00000451503 251 ntBASIC3.25□□□□□ -1.89
SCN4AP35499 CFTRP1-201ENST00000456646 183 ntBASIC3.25□□□□□ -1.89
SCN4AP35499 RN7SL330P-201ENST00000469709 307 ntBASIC3.25□□□□□ -1.89
SCN4AP35499 RPS4XP6-201ENST00000477670 797 ntBASIC3.25□□□□□ -1.89
SCN4AP35499 AC117525.1-201ENST00000515228 503 ntBASIC3.25□□□□□ -1.89
SCN4AP35499 AC243972.3-201ENST00000539655 198 ntBASIC3.25□□□□□ -1.89
SCN4AP35499 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.25□□□□□ -1.89
SCN4AP35499 AC078899.3-201ENST00000599065 212 ntBASIC3.25□□□□□ -1.89
SCN4AP35499 AP006248.2-201ENST00000623309 592 ntBASIC3.25□□□□□ -1.89
SCN4AP35499 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
SCN4AP35499 AC008264.2-201ENST00000610193 3731 ntBASIC3.25□□□□□ -1.89
SCN4AP35499 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SCN4AP35499 ZNF72P-201ENST00000425869 1908 ntBASIC3.24□□□□□ -1.89
SCN4AP35499 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
SCN4AP35499 RNU6-386P-201ENST00000362650 107 ntBASIC3.24□□□□□ -1.89
SCN4AP35499 U3.6-201ENST00000363622 211 ntBASIC3.24□□□□□ -1.89
SCN4AP35499 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCN4AP35499 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.24□□□□□ -1.89
SCN4AP35499 RN7SKP58-201ENST00000411010 305 ntBASIC3.24□□□□□ -1.89
SCN4AP35499 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SCN4AP35499 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.24□□□□□ -1.89
SCN4AP35499 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.24□□□□□ -1.89
SCN4AP35499 NDUFS5P3-201ENST00000450668 321 ntBASIC3.24□□□□□ -1.89
SCN4AP35499 MTND3P6-201ENST00000485242 339 ntBASIC3.24□□□□□ -1.89
SCN4AP35499 FAM60DP-201ENST00000524174 632 ntBASIC3.24□□□□□ -1.89
SCN4AP35499 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.24□□□□□ -1.89
SCN4AP35499 AC007424.1-203ENST00000554613 687 ntBASIC3.24□□□□□ -1.89
SCN4AP35499 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.24□□□□□ -1.89
SCN4AP35499 AL356274.1-201ENST00000617064 410 ntBASIC3.24□□□□□ -1.89
SCN4AP35499 AC092326.2-201ENST00000624772 1561 ntBASIC3.24□□□□□ -1.89
SCN4AP35499 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCN4AP35499 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCN4AP35499 RNU4-26P-201ENST00000410270 107 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.23□□□□□ -1.89
SCN4AP35499 RPL7P10-201ENST00000417407 739 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 AL356806.1-201ENST00000422524 916 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 AC012498.1-201ENST00000424037 437 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 RPL23AP15-201ENST00000450202 459 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.23□□□□□ -1.89
SCN4AP35499 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.23□□□□□ -1.89
SCN4AP35499 RN7SKP34-201ENST00000516142 244 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.23□□□□□ -1.89
SCN4AP35499 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.23□□□□□ -1.89
SCN4AP35499 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN4AP35499 AC007621.1-201ENST00000604544 437 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.23□□□□□ -1.89
SCN4AP35499 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.23□□□□□ -1.89
SCN4AP35499 RPL23AP61-201ENST00000623642 466 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 HSPA8P4-201ENST00000511877 1920 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCN4AP35499 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SCN4AP35499 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCN4AP35499 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCN4AP35499 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SCN4AP35499 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCN4AP35499 DPH3P2-201ENST00000422618 250 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 AC009969.1-201ENST00000438726 172 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 RPL21P18-201ENST00000469899 480 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 AC126121.1-201ENST00000482313 553 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SCN4AP35499 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN4AP35499 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.23□□□□□ -1.89
SCN4AP35499 RNU6-889P-201ENST00000517189 103 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN4AP35499 AL391156.1-201ENST00000554965 554 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN4AP35499 AC009163.5-201ENST00000575421 637 ntBASIC3.23□□□□□ -1.89
SCN4AP35499 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.23□□□□□ -1.89
SCN4AP35499 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SCN4AP35499 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCN4AP35499 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SCN4AP35499 XIAPP3-201ENST00000312918 795 ntBASIC3.22□□□□□ -1.89
SCN4AP35499 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SCN4AP35499 CYCSP45-201ENST00000402289 315 ntBASIC3.22□□□□□ -1.89
SCN4AP35499 AC245054.2-201ENST00000415639 319 ntBASIC3.22□□□□□ -1.89
SCN4AP35499 Z98742.3-201ENST00000418637 326 ntBASIC3.22□□□□□ -1.89
SCN4AP35499 AC093151.1-201ENST00000427711 313 ntBASIC3.22□□□□□ -1.89
SCN4AP35499 ARF4P2-201ENST00000430209 526 ntBASIC3.22□□□□□ -1.89
SCN4AP35499 RPS20P5-201ENST00000434808 360 ntBASIC3.22□□□□□ -1.89
SCN4AP35499 RSL24D1P2-201ENST00000445584 366 ntBASIC3.22□□□□□ -1.89
SCN4AP35499 RN7SL75P-201ENST00000461926 281 ntBASIC3.22□□□□□ -1.89
SCN4AP35499 AP000926.1-201ENST00000479573 241 ntBASIC3.22□□□□□ -1.89
SCN4AP35499 AC093278.1-201ENST00000494700 600 ntBASIC3.22□□□□□ -1.89
SCN4AP35499 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.22□□□□□ -1.89
SCN4AP35499 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms