Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 MIR591-201ENST00000385290 95 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 AL355615.1-201ENST00000406187 641 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 AC009237.2-201ENST00000421358 284 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.24□□□□□ -1.89
SHMT2P34897 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.24□□□□□ -1.89
SHMT2P34897 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.24□□□□□ -1.89
SHMT2P34897 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.24□□□□□ -1.89
SHMT2P34897 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.24□□□□□ -1.89
SHMT2P34897 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.24□□□□□ -1.89
SHMT2P34897 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.24□□□□□ -1.89
SHMT2P34897 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.24□□□□□ -1.89
SHMT2P34897 PTGES3P5-201ENST00000455109 434 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.24□□□□□ -1.89
SHMT2P34897 PLGLA-201ENST00000465668 449 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 AC146507.1-201ENST00000468335 354 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 RPL23AP44-201ENST00000482216 473 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 AL358832.1-201ENST00000497800 389 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 AC108078.3-201ENST00000502633 489 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHMT2P34897 PHBP14-201ENST00000512887 367 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 AC093755.1-201ENST00000512950 1023 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 AC010265.1-201ENST00000513509 211 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 RN7SKP116-201ENST00000516902 319 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 RNU4-60P-201ENST00000517239 135 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
SHMT2P34897 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.24□□□□□ -1.89
SHMT2P34897 AC006518.2-201ENST00000542513 940 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.24□□□□□ -1.89
SHMT2P34897 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.24□□□□□ -1.89
SHMT2P34897 AL389895.1-201ENST00000554127 252 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 CENPUP2-201ENST00000555897 1186 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.24□□□□□ -1.89
SHMT2P34897 AC090425.2-201ENST00000608818 501 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 AL159169.3-201ENST00000608871 561 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 AC018926.1-201ENST00000616335 435 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 SNORD39.4-201ENST00000620099 78 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 SGO1P1-201ENST00000603525 1447 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHMT2P34897 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHMT2P34897 MTND5P1-201ENST00000445440 1375 ntBASIC3.24□□□□□ -1.89
SHMT2P34897 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHMT2P34897 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SHMT2P34897 AC010733.2-201ENST00000589496 5702 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHMT2P34897 RNVU1-14-201ENST00000384770 164 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 AL035405.1-201ENST00000400795 710 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 AC092638.1-201ENST00000411966 1275 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 AL024507.1-201ENST00000412741 274 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHMT2P34897 RPS3AP9-201ENST00000417027 792 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 AC245291.1-201ENST00000419501 328 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 AC012065.2-201ENST00000421295 375 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.23□□□□□ -1.89
SHMT2P34897 PSMA2P3-201ENST00000429685 675 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 CKS1BP5-201ENST00000434172 273 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.23□□□□□ -1.89
SHMT2P34897 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.23□□□□□ -1.89
SHMT2P34897 AC234064.1-201ENST00000436312 247 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.23□□□□□ -1.89
SHMT2P34897 HMGN1P5-201ENST00000448591 263 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.23□□□□□ -1.89
SHMT2P34897 RPS20P32-201ENST00000456044 356 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.23□□□□□ -1.89
SHMT2P34897 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.23□□□□□ -1.89
SHMT2P34897 AC093801.2-201ENST00000503966 1050 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 AC110794.1-201ENST00000505816 425 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.23□□□□□ -1.89
SHMT2P34897 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.23□□□□□ -1.89
SHMT2P34897 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.23□□□□□ -1.89
SHMT2P34897 MTND2P7-201ENST00000521337 640 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.23□□□□□ -1.89
SHMT2P34897 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.23□□□□□ -1.89
SHMT2P34897 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.23□□□□□ -1.89
SHMT2P34897 AC073657.2-201ENST00000605661 303 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHMT2P34897 AC005156.1-201ENST00000613371 573 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 AC105227.2-201ENST00000615075 605 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 AC092326.2-201ENST00000624772 1561 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SHMT2P34897 SRP72P2-201ENST00000344851 1979 ntBASIC3.23□□□□□ -1.89
SHMT2P34897 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHMT2P34897 AL672296.1-201ENST00000427780 2158 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 ZNF542P-204ENST00000482727 1305 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHMT2P34897 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHMT2P34897 MTCO1P24-201ENST00000515438 1558 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SHMT2P34897 RNU5B-4P-201ENST00000363508 111 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 OR1L1-202ENST00000373686 1083 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.22□□□□□ -1.89
SHMT2P34897 RNU6-549P-201ENST00000384433 107 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 EI24P2-201ENST00000397776 1076 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 SFR1P1-201ENST00000403720 688 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.22□□□□□ -1.89
SHMT2P34897 AL356968.1-201ENST00000416622 474 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.22□□□□□ -1.89
SHMT2P34897 RPP40P1-201ENST00000426762 456 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 AC005326.1-201ENST00000429197 123 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms