Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXC13P31276 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXC13P31276 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXC13P31276 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HOXC13P31276 RNU6-1066P-201ENST00000363573 105 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 DEFB109C-201ENST00000382575 264 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 DEFB109B-201ENST00000382656 264 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 MIR491-201ENST00000384877 84 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 RNU6-821P-201ENST00000390995 107 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 RPL7AP73-201ENST00000413490 353 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 JKAMPP1-201ENST00000413804 919 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 FCF1P2-201ENST00000415284 583 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXC13P31276 Z93242.1-201ENST00000427102 353 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 AC005345.1-201ENST00000431868 217 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 MRPS18BP2-201ENST00000434310 759 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 KCTD9P3-201ENST00000434597 1169 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXC13P31276 AC092393.1-201ENST00000439625 742 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXC13P31276 HMGB1P15-201ENST00000453854 435 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXC13P31276 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXC13P31276 RN7SL330P-201ENST00000469709 307 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXC13P31276 AC079203.1-201ENST00000487972 404 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 NIPA2P2-201ENST00000496376 1083 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 MTCYBP37-201ENST00000510642 1133 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 RNA5SP179-201ENST00000517284 121 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXC13P31276 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXC13P31276 OR7E13P-201ENST00000526052 910 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 DEFB130C-202ENST00000530001 230 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 ZNF705CP-201ENST00000530515 889 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXC13P31276 AC092747.2-201ENST00000545069 983 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 AL121603.1-201ENST00000553815 142 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXC13P31276 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXC13P31276 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXC13P31276 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
HOXC13P31276 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.06□□□□□ -1.76
HOXC13P31276 AC110760.3-201ENST00000598794 467 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 AL606834.3-201ENST00000602615 496 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 AC073968.1-201ENST00000618594 637 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 PLCE1P1-201ENST00000622094 305 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 AC079416.3-201ENST00000624479 549 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.06□□□□□ -1.76
HOXC13P31276 AC004808.1-201ENST00000627671 721 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXC13P31276 ZNF663P-202ENST00000641770 1131 ntBASIC4.06□□□□□ -1.76
HOXC13P31276 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXC13P31276 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXC13P31276 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXC13P31276 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXC13P31276 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXC13P31276 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
HOXC13P31276 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXC13P31276 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC13P31276 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.05□□□□□ -1.76
HOXC13P31276 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC13P31276 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC13P31276 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HOXC13P31276 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC13P31276 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC13P31276 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC13P31276 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HOXC13P31276 RNU6-251P-201ENST00000363235 104 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 MIR217-201ENST00000384817 110 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 MIR199A2-201ENST00000385289 110 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 MTCO1P56-201ENST00000401674 224 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 SNORA11.2-201ENST00000408318 127 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 RPL21P109-201ENST00000422213 475 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 AL139247.1-201ENST00000422768 325 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.05□□□□□ -1.76
HOXC13P31276 MTND5P25-201ENST00000430499 799 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 USP9YP31-201ENST00000431405 881 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC13P31276 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXC13P31276 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXC13P31276 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXC13P31276 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.05□□□□□ -1.76
HOXC13P31276 HMGB1P16-201ENST00000447155 540 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXC13P31276 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXC13P31276 AC007967.1-201ENST00000455422 1159 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 MTCO3P2-201ENST00000457365 171 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 snoU13.4-201ENST00000458916 104 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 AC104982.1-201ENST00000478775 574 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 AC084024.2-201ENST00000503480 791 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXC13P31276 HMGB3P15-201ENST00000507326 574 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC13P31276 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXC13P31276 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.05□□□□□ -1.76
HOXC13P31276 AP000790.1-201ENST00000528891 737 ntBASIC4.05□□□□□ -1.76
HOXC13P31276 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXC13P31276 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms