Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC092162.3-201ENST00000624511 1624 ntBASIC6.14□□□□□ -1.43
RXRBP28702 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC6.14□□□□□ -1.43
RXRBP28702 AL359922.3-201ENST00000624779 1670 ntBASIC6.14□□□□□ -1.43
RXRBP28702 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
RXRBP28702 EIF2AP4-201ENST00000424793 1781 ntBASIC6.13□□□□□ -1.43
RXRBP28702 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.13□□□□□ -1.43
RXRBP28702 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.13□□□□□ -1.43
RXRBP28702 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RXRBP28702 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RXRBP28702 RNU6-1066P-201ENST00000363573 105 ntBASIC6.13□□□□□ -1.43
RXRBP28702 RNY4P34-201ENST00000364779 95 ntBASIC6.13□□□□□ -1.43
RXRBP28702 Y_RNA.431-201ENST00000384086 102 ntBASIC6.13□□□□□ -1.43
RXRBP28702 RNU6-533P-201ENST00000384144 107 ntBASIC6.13□□□□□ -1.43
RXRBP28702 AL035079.1-201ENST00000405210 287 ntBASIC6.13□□□□□ -1.43
RXRBP28702 RNA5SP498-201ENST00000411342 120 ntBASIC6.13□□□□□ -1.43
RXRBP28702 VTI1BP4-201ENST00000427516 527 ntBASIC6.13□□□□□ -1.43
RXRBP28702 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC6.13□□□□□ -1.43
RXRBP28702 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.13□□□□□ -1.43
RXRBP28702 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
RXRBP28702 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.13□□□□□ -1.43
RXRBP28702 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC6.13□□□□□ -1.43
RXRBP28702 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC6.13□□□□□ -1.43
RXRBP28702 RNU6-885P-201ENST00000516607 104 ntBASIC6.13□□□□□ -1.43
RXRBP28702 RNA5SP135-201ENST00000517019 125 ntBASIC6.13□□□□□ -1.43
RXRBP28702 RNU2-46P-201ENST00000517038 113 ntBASIC6.13□□□□□ -1.43
RXRBP28702 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.13□□□□□ -1.43
RXRBP28702 AP001189.2-201ENST00000527320 189 ntBASIC6.13□□□□□ -1.43
RXRBP28702 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC6.13□□□□□ -1.43
RXRBP28702 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.13□□□□□ -1.43
RXRBP28702 AC011611.1-201ENST00000552179 197 ntBASIC6.13□□□□□ -1.43
RXRBP28702 AL355836.1-201ENST00000555951 870 ntBASIC6.13□□□□□ -1.43
RXRBP28702 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC6.13□□□□□ -1.43
RXRBP28702 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.13□□□□□ -1.43
RXRBP28702 RN7SL600P-201ENST00000581811 299 ntBASIC6.13□□□□□ -1.43
RXRBP28702 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
RXRBP28702 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RXRBP28702 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.13□□□□□ -1.43
RXRBP28702 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RXRBP28702 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RXRBP28702 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RXRBP28702 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RXRBP28702 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RXRBP28702 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RXRBP28702 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RXRBP28702 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RXRBP28702 OR5P1P-201ENST00000299512 925 ntBASIC6.12□□□□□ -1.43
RXRBP28702 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RXRBP28702 RNU6-216P-201ENST00000363282 104 ntBASIC6.12□□□□□ -1.43
RXRBP28702 RNU6-254P-201ENST00000363377 107 ntBASIC6.12□□□□□ -1.43
RXRBP28702 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RXRBP28702 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.12□□□□□ -1.43
RXRBP28702 RNU6-185P-201ENST00000384421 107 ntBASIC6.12□□□□□ -1.43
RXRBP28702 AL122016.1-201ENST00000403365 367 ntBASIC6.12□□□□□ -1.43
RXRBP28702 RNA5SP118-201ENST00000410385 109 ntBASIC6.12□□□□□ -1.43
RXRBP28702 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.12□□□□□ -1.43
RXRBP28702 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.12□□□□□ -1.43
RXRBP28702 AC109583.1-201ENST00000432156 268 ntBASIC6.12□□□□□ -1.43
RXRBP28702 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.12□□□□□ -1.43
RXRBP28702 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6.12□□□□□ -1.43
RXRBP28702 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.12□□□□□ -1.43
RXRBP28702 AC132479.1-201ENST00000449160 144 ntBASIC6.12□□□□□ -1.43
RXRBP28702 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC6.12□□□□□ -1.43
RXRBP28702 Z82190.1-201ENST00000454534 490 ntBASIC6.12□□□□□ -1.43
RXRBP28702 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RXRBP28702 PPIAP15-201ENST00000479662 484 ntBASIC6.12□□□□□ -1.43
RXRBP28702 AC007182.2-201ENST00000489251 402 ntBASIC6.12□□□□□ -1.43
RXRBP28702 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RXRBP28702 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RXRBP28702 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.12□□□□□ -1.43
RXRBP28702 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RXRBP28702 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.12□□□□□ -1.43
RXRBP28702 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.12□□□□□ -1.43
RXRBP28702 AC048346.1-201ENST00000510247 144 ntBASIC6.12□□□□□ -1.43
RXRBP28702 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC6.12□□□□□ -1.43
RXRBP28702 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC6.12□□□□□ -1.43
RXRBP28702 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RXRBP28702 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RXRBP28702 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RXRBP28702 RNU6-1261P-201ENST00000517194 104 ntBASIC6.12□□□□□ -1.43
RXRBP28702 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.12□□□□□ -1.43
RXRBP28702 AP003467.2-201ENST00000520175 319 ntBASIC6.12□□□□□ -1.43
RXRBP28702 MTCYBP13-201ENST00000578634 1093 ntBASIC6.12□□□□□ -1.43
RXRBP28702 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.12□□□□□ -1.43
RXRBP28702 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC6.12□□□□□ -1.43
RXRBP28702 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.12□□□□□ -1.43
RXRBP28702 AL355802.3-201ENST00000607571 545 ntBASIC6.12□□□□□ -1.43
RXRBP28702 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.12□□□□□ -1.43
RXRBP28702 AL121950.1-201ENST00000624993 2077 ntBASIC6.12□□□□□ -1.43
RXRBP28702 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RXRBP28702 MIR1302-1-201ENST00000637932 143 ntBASIC6.12□□□□□ -1.43
RXRBP28702 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RXRBP28702 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RXRBP28702 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.12□□□□□ -1.43
RXRBP28702 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RXRBP28702 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RXRBP28702 AC138907.8-201ENST00000623981 2256 ntBASIC6.11□□□□□ -1.43
RXRBP28702 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RXRBP28702 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.11□□□□□ -1.43
RXRBP28702 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RXRBP28702 MAPK10-349ENST00000641767 3661 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms