Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MIR1289-2-201ENST00000408360 111 ntBASIC2.65□□□□□ -1.98
COL5A1P20908 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.65□□□□□ -1.98
COL5A1P20908 AL031736.2-201ENST00000426573 787 ntBASIC2.65□□□□□ -1.98
COL5A1P20908 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.65□□□□□ -1.98
COL5A1P20908 AL591806.2-201ENST00000433122 173 ntBASIC2.65□□□□□ -1.98
COL5A1P20908 MTCO1P52-201ENST00000433928 531 ntBASIC2.65□□□□□ -1.98
COL5A1P20908 MTND4P15-201ENST00000437913 1033 ntBASIC2.65□□□□□ -1.98
COL5A1P20908 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.65□□□□□ -1.98
COL5A1P20908 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.65□□□□□ -1.98
COL5A1P20908 MTCYBP14-201ENST00000457471 715 ntBASIC2.65□□□□□ -1.98
COL5A1P20908 AC133134.1-201ENST00000466800 359 ntBASIC2.65□□□□□ -1.98
COL5A1P20908 AC078785.3-201ENST00000476607 425 ntBASIC2.65□□□□□ -1.98
COL5A1P20908 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.65□□□□□ -1.98
COL5A1P20908 RNU6-760P-201ENST00000516078 97 ntBASIC2.65□□□□□ -1.98
COL5A1P20908 FAM60DP-201ENST00000524174 632 ntBASIC2.65□□□□□ -1.98
COL5A1P20908 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.65□□□□□ -1.98
COL5A1P20908 AL442163.2-201ENST00000553912 710 ntBASIC2.65□□□□□ -1.98
COL5A1P20908 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.65□□□□□ -1.98
COL5A1P20908 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.65□□□□□ -1.98
COL5A1P20908 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.65□□□□□ -1.98
COL5A1P20908 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
COL5A1P20908 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.65□□□□□ -1.98
COL5A1P20908 TAB3P1-202ENST00000452645 1634 ntBASIC2.65□□□□□ -1.98
COL5A1P20908 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL5A1P20908 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.65□□□□□ -1.99
COL5A1P20908 MIR26A1-201ENST00000362205 77 ntBASIC2.65□□□□□ -1.99
COL5A1P20908 AL589994.1-201ENST00000404962 340 ntBASIC2.65□□□□□ -1.99
COL5A1P20908 SNORA3.2-201ENST00000408221 125 ntBASIC2.65□□□□□ -1.99
COL5A1P20908 UBE2D3P1-201ENST00000436669 444 ntBASIC2.65□□□□□ -1.99
COL5A1P20908 Z99127.2-201ENST00000441426 334 ntBASIC2.65□□□□□ -1.99
COL5A1P20908 DYNLL1P6-201ENST00000503440 264 ntBASIC2.65□□□□□ -1.99
COL5A1P20908 KLHL2P1-201ENST00000508691 521 ntBASIC2.65□□□□□ -1.99
COL5A1P20908 AC096725.1-201ENST00000514266 313 ntBASIC2.65□□□□□ -1.99
COL5A1P20908 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.65□□□□□ -1.99
COL5A1P20908 AP003049.1-201ENST00000529418 457 ntBASIC2.65□□□□□ -1.99
COL5A1P20908 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.65□□□□□ -1.99
COL5A1P20908 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.65□□□□□ -1.99
COL5A1P20908 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.65□□□□□ -1.99
COL5A1P20908 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.65□□□□□ -1.99
COL5A1P20908 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.65□□□□□ -1.99
COL5A1P20908 AC010872.1-201ENST00000624225 675 ntBASIC2.65□□□□□ -1.99
COL5A1P20908 CTSLP2-204ENST00000629029 392 ntBASIC2.65□□□□□ -1.99
COL5A1P20908 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL5A1P20908 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL5A1P20908 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL5A1P20908 EXOC5P1-201ENST00000510543 1969 ntBASIC2.64□□□□□ -1.99
COL5A1P20908 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL5A1P20908 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL5A1P20908 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.64□□□□□ -1.99
COL5A1P20908 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL5A1P20908 Y_RNA.110-201ENST00000363220 99 ntBASIC2.64□□□□□ -1.99
COL5A1P20908 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL5A1P20908 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL5A1P20908 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL5A1P20908 RPS15AP6-201ENST00000420703 385 ntBASIC2.64□□□□□ -1.99
COL5A1P20908 SEC63P1-201ENST00000425785 1258 ntBASIC2.64□□□□□ -1.99
COL5A1P20908 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.64□□□□□ -1.99
COL5A1P20908 HMGB3P12-201ENST00000438745 556 ntBASIC2.64□□□□□ -1.99
COL5A1P20908 AC114878.1-201ENST00000441166 358 ntBASIC2.64□□□□□ -1.99
COL5A1P20908 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.64□□□□□ -1.99
COL5A1P20908 RPL31P53-201ENST00000457065 348 ntBASIC2.64□□□□□ -1.99
COL5A1P20908 AP000893.1-201ENST00000474462 794 ntBASIC2.64□□□□□ -1.99
COL5A1P20908 AC126121.1-201ENST00000482313 553 ntBASIC2.64□□□□□ -1.99
COL5A1P20908 LINC00557-201ENST00000563184 1279 ntBASIC2.64□□□□□ -1.99
COL5A1P20908 CD24P2-201ENST00000565486 219 ntBASIC2.64□□□□□ -1.99
COL5A1P20908 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.64□□□□□ -1.99
COL5A1P20908 AC006254.3-201ENST00000603353 884 ntBASIC2.64□□□□□ -1.99
COL5A1P20908 AP006248.2-201ENST00000623309 592 ntBASIC2.64□□□□□ -1.99
COL5A1P20908 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL5A1P20908 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
COL5A1P20908 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
COL5A1P20908 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
COL5A1P20908 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
COL5A1P20908 AC090229.1-201ENST00000590983 1609 ntBASIC2.64□□□□□ -1.99
COL5A1P20908 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
COL5A1P20908 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.63□□□□□ -1.99
COL5A1P20908 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL5A1P20908 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL5A1P20908 Y_RNA.4-201ENST00000362333 112 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 RNU6-482P-201ENST00000391068 107 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.63□□□□□ -1.99
COL5A1P20908 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.63□□□□□ -1.99
COL5A1P20908 AL513043.1-201ENST00000439124 535 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 CACYBPP2-201ENST00000453625 678 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 SEPT7P6-201ENST00000469999 1143 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.63□□□□□ -1.99
COL5A1P20908 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.63□□□□□ -1.99
COL5A1P20908 USP9YP5-201ENST00000511770 630 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 AC027338.1-201ENST00000514840 825 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 AC093331.1-201ENST00000521474 169 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.63□□□□□ -1.99
COL5A1P20908 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.63□□□□□ -1.99
COL5A1P20908 AC078899.3-201ENST00000599065 212 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.63□□□□□ -1.99
COL5A1P20908 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.63□□□□□ -1.99
COL5A1P20908 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL5A1P20908 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
COL5A1P20908 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL5A1P20908 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL5A1P20908 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms