Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
CD44P16070 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.48□□□□□ -1.21
CD44P16070 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CD44P16070 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CD44P16070 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
CD44P16070 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CD44P16070 RN7SKP191-201ENST00000364713 306 ntBASIC7.48□□□□□ -1.21
CD44P16070 RNU6-1180P-201ENST00000364935 107 ntBASIC7.48□□□□□ -1.21
CD44P16070 RNU6-637P-201ENST00000384050 107 ntBASIC7.48□□□□□ -1.21
CD44P16070 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CD44P16070 SNORD12B-201ENST00000410433 91 ntBASIC7.48□□□□□ -1.21
CD44P16070 RNU2-15P-201ENST00000410692 191 ntBASIC7.48□□□□□ -1.21
CD44P16070 RN7SKP39-201ENST00000410773 322 ntBASIC7.48□□□□□ -1.21
CD44P16070 RN7SKP188-201ENST00000410789 317 ntBASIC7.48□□□□□ -1.21
CD44P16070 AL354714.5-201ENST00000450131 590 ntBASIC7.48□□□□□ -1.21
CD44P16070 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC7.48□□□□□ -1.21
CD44P16070 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.48□□□□□ -1.21
CD44P16070 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.48□□□□□ -1.21
CD44P16070 RNU6-352P-201ENST00000516908 107 ntBASIC7.48□□□□□ -1.21
CD44P16070 SMILR-201ENST00000533992 553 ntTSL 4 BASIC7.48□□□□□ -1.21
CD44P16070 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC7.48□□□□□ -1.21
CD44P16070 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.48□□□□□ -1.21
CD44P16070 AC007347.2-201ENST00000623044 180 ntBASIC7.48□□□□□ -1.21
CD44P16070 AC243725.1-201ENST00000637164 436 ntBASIC7.48□□□□□ -1.21
CD44P16070 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CD44P16070 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.48□□□□□ -1.21
CD44P16070 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.48□□□□□ -1.21
CD44P16070 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CD44P16070 ZNF204P-201ENST00000416749 2397 ntBASIC7.48□□□□□ -1.21
CD44P16070 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.48□□□□□ -1.21
CD44P16070 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.48□□□□□ -1.21
CD44P16070 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CD44P16070 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CD44P16070 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CD44P16070 AL731532.2-201ENST00000623542 1953 ntBASIC7.48□□□□□ -1.21
CD44P16070 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CD44P16070 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CD44P16070 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CD44P16070 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.47□□□□□ -1.21
CD44P16070 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.47□□□□□ -1.21
CD44P16070 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.47□□□□□ -1.21
CD44P16070 RNU6-1272P-201ENST00000362776 107 ntBASIC7.47□□□□□ -1.21
CD44P16070 RNU6-879P-201ENST00000364328 108 ntBASIC7.47□□□□□ -1.21
CD44P16070 U3.22-201ENST00000391120 215 ntBASIC7.47□□□□□ -1.21
CD44P16070 U3.29-201ENST00000391296 212 ntBASIC7.47□□□□□ -1.21
CD44P16070 SOD1P1-201ENST00000407803 440 ntBASIC7.47□□□□□ -1.21
CD44P16070 CYCSP17-201ENST00000407870 315 ntBASIC7.47□□□□□ -1.21
CD44P16070 ELOCP19-201ENST00000411919 318 ntBASIC7.47□□□□□ -1.21
CD44P16070 RPL12P10-201ENST00000413498 498 ntBASIC7.47□□□□□ -1.21
CD44P16070 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.47□□□□□ -1.21
CD44P16070 RPS15AP40-201ENST00000419621 391 ntBASIC7.47□□□□□ -1.21
CD44P16070 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC7.47□□□□□ -1.21
CD44P16070 BTF3P11-201ENST00000426582 477 ntBASIC7.47□□□□□ -1.21
CD44P16070 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CD44P16070 TRAPPC2P9-201ENST00000434556 343 ntBASIC7.47□□□□□ -1.21
CD44P16070 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.47□□□□□ -1.21
CD44P16070 CR391992.1-201ENST00000438601 394 ntBASIC7.47□□□□□ -1.21
CD44P16070 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.47□□□□□ -1.21
CD44P16070 AL353748.1-201ENST00000440753 474 ntBASIC7.47□□□□□ -1.21
CD44P16070 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.47□□□□□ -1.21
CD44P16070 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.47□□□□□ -1.21
CD44P16070 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.47□□□□□ -1.21
CD44P16070 SRP68P2-201ENST00000456184 254 ntBASIC7.47□□□□□ -1.21
CD44P16070 RN7SL654P-201ENST00000479178 292 ntBASIC7.47□□□□□ -1.21
CD44P16070 RNA5SP278-201ENST00000517055 102 ntBASIC7.47□□□□□ -1.21
CD44P16070 AC073581.1-201ENST00000519036 575 ntBASIC7.47□□□□□ -1.21
CD44P16070 RN7SL652P-201ENST00000577769 300 ntBASIC7.47□□□□□ -1.21
CD44P16070 MIR6726-201ENST00000613751 61 ntBASIC7.47□□□□□ -1.21
CD44P16070 MIR6731-201ENST00000614863 72 ntBASIC7.47□□□□□ -1.21
CD44P16070 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC7.47□□□□□ -1.21
CD44P16070 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC7.47□□□□□ -1.21
CD44P16070 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.47□□□□□ -1.21
CD44P16070 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.47□□□□□ -1.21
CD44P16070 AC005225.5-201ENST00000623547 2225 ntBASIC7.47□□□□□ -1.21
CD44P16070 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CD44P16070 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.21
CD44P16070 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.47□□□□□ -1.21
CD44P16070 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CD44P16070 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CD44P16070 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC7.46□□□□□ -1.21
CD44P16070 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CD44P16070 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
CD44P16070 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.46□□□□□ -1.21
CD44P16070 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CD44P16070 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CD44P16070 Y_RNA.230-201ENST00000364348 109 ntBASIC7.46□□□□□ -1.22
CD44P16070 SNORD82-201ENST00000365530 70 ntBASIC7.46□□□□□ -1.22
CD44P16070 RNU6-20P-201ENST00000384106 107 ntBASIC7.46□□□□□ -1.22
CD44P16070 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CD44P16070 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CD44P16070 LAP3P1-201ENST00000403648 294 ntBASIC7.46□□□□□ -1.22
CD44P16070 RNU6-592P-201ENST00000411333 103 ntBASIC7.46□□□□□ -1.22
CD44P16070 CBX1P3-201ENST00000413296 527 ntBASIC7.46□□□□□ -1.22
CD44P16070 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.46□□□□□ -1.22
CD44P16070 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.46□□□□□ -1.22
CD44P16070 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.46□□□□□ -1.22
CD44P16070 AL590128.1-201ENST00000433407 286 ntBASIC7.46□□□□□ -1.22
CD44P16070 AC009518.3-201ENST00000438972 253 ntBASIC7.46□□□□□ -1.22
CD44P16070 RANP8-201ENST00000444720 713 ntBASIC7.46□□□□□ -1.22
CD44P16070 HIGD1AP2-201ENST00000446367 280 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms