Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC022336.2-201ENST00000568966 2538 ntBASIC4.07□□□□□ -1.76
CFTRP13569 AL161781.1-201ENST00000354277 403 ntBASIC4.07□□□□□ -1.76
CFTRP13569 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CFTRP13569 SNORA64-201ENST00000384674 134 ntBASIC4.07□□□□□ -1.76
CFTRP13569 U8.13-201ENST00000390842 128 ntBASIC4.07□□□□□ -1.76
CFTRP13569 GSTA9P-201ENST00000406231 611 ntBASIC4.07□□□□□ -1.76
CFTRP13569 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC4.07□□□□□ -1.76
CFTRP13569 VN1R17P-201ENST00000472048 1090 ntBASIC4.07□□□□□ -1.76
CFTRP13569 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.07□□□□□ -1.76
CFTRP13569 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC4.07□□□□□ -1.76
CFTRP13569 VN1R9P-201ENST00000614184 867 ntBASIC4.07□□□□□ -1.76
CFTRP13569 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.07□□□□□ -1.76
CFTRP13569 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CFTRP13569 AC025181.1-201ENST00000477507 416 ntBASIC4.06□□□□□ -1.76
CFTRP13569 AC091544.1-201ENST00000484702 348 ntBASIC4.06□□□□□ -1.76
CFTRP13569 AL024509.2-201ENST00000493462 493 ntBASIC4.06□□□□□ -1.76
CFTRP13569 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CFTRP13569 AC055876.1-202ENST00000567053 138 ntBASIC4.06□□□□□ -1.76
CFTRP13569 OR4G2P-202ENST00000641004 1759 ntBASIC4.06□□□□□ -1.76
CFTRP13569 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.06□□□□□ -1.76
CFTRP13569 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC4.06□□□□□ -1.76
CFTRP13569 AL591416.1-201ENST00000404015 867 ntBASIC4.05□□□□□ -1.76
CFTRP13569 RPL23AP48-201ENST00000406913 488 ntBASIC4.05□□□□□ -1.76
CFTRP13569 ISCA1P6-201ENST00000427740 390 ntBASIC4.05□□□□□ -1.76
CFTRP13569 MTCO3P11-201ENST00000455103 774 ntBASIC4.05□□□□□ -1.76
CFTRP13569 AC103975.1-201ENST00000482506 483 ntBASIC4.05□□□□□ -1.76
CFTRP13569 AC104090.1-201ENST00000506341 1171 ntBASIC4.05□□□□□ -1.76
CFTRP13569 AC112673.1-201ENST00000513168 575 ntBASIC4.05□□□□□ -1.76
CFTRP13569 RN7SKP282-201ENST00000516824 299 ntBASIC4.05□□□□□ -1.76
CFTRP13569 RN7SKP219-201ENST00000516825 296 ntBASIC4.05□□□□□ -1.76
CFTRP13569 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CFTRP13569 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CFTRP13569 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.05□□□□□ -1.76
CFTRP13569 AL353997.5-201ENST00000618886 171 ntBASIC4.05□□□□□ -1.76
CFTRP13569 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CFTRP13569 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CFTRP13569 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.05□□□□□ -1.76
CFTRP13569 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CFTRP13569 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CFTRP13569 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
CFTRP13569 RNA5SP210-201ENST00000391034 120 ntBASIC4.05□□□□□ -1.76
CFTRP13569 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4.05□□□□□ -1.76
CFTRP13569 AL158825.1-201ENST00000414735 521 ntBASIC4.05□□□□□ -1.76
CFTRP13569 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.05□□□□□ -1.76
CFTRP13569 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.05□□□□□ -1.76
CFTRP13569 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CFTRP13569 RPS27P29-201ENST00000463110 252 ntBASIC4.05□□□□□ -1.76
CFTRP13569 RN7SL499P-201ENST00000481141 276 ntBASIC4.05□□□□□ -1.76
CFTRP13569 AC106872.3-201ENST00000495104 446 ntBASIC4.05□□□□□ -1.76
CFTRP13569 AC016727.1-205ENST00000605437 569 ntBASIC4.05□□□□□ -1.76
CFTRP13569 AC104237.2-201ENST00000612456 443 ntBASIC4.05□□□□□ -1.76
CFTRP13569 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CFTRP13569 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CFTRP13569 RNA5SP502-201ENST00000362694 119 ntBASIC4.04□□□□□ -1.76
CFTRP13569 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.04□□□□□ -1.76
CFTRP13569 MIR708-201ENST00000390708 88 ntBASIC4.04□□□□□ -1.76
CFTRP13569 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.04□□□□□ -1.76
CFTRP13569 AC108860.1-201ENST00000484521 383 ntBASIC4.04□□□□□ -1.76
CFTRP13569 AC021146.5-201ENST00000503544 545 ntBASIC4.04□□□□□ -1.76
CFTRP13569 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.04□□□□□ -1.76
CFTRP13569 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.04□□□□□ -1.76
CFTRP13569 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.04□□□□□ -1.76
CFTRP13569 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.04□□□□□ -1.76
CFTRP13569 AC044913.1-201ENST00000557200 430 ntBASIC4.04□□□□□ -1.76
CFTRP13569 AC025281.1-201ENST00000567026 265 ntBASIC4.04□□□□□ -1.76
CFTRP13569 AC061975.8-201ENST00000587058 721 ntBASIC4.04□□□□□ -1.76
CFTRP13569 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.04□□□□□ -1.76
CFTRP13569 AP000942.3-201ENST00000603702 160 ntBASIC4.04□□□□□ -1.76
CFTRP13569 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CFTRP13569 AC002543.1-201ENST00000299783 1954 ntBASIC4.03□□□□□ -1.76
CFTRP13569 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CFTRP13569 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CFTRP13569 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.03□□□□□ -1.76
CFTRP13569 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.03□□□□□ -1.76
CFTRP13569 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.03□□□□□ -1.76
CFTRP13569 AP001207.1-201ENST00000524051 481 ntBASIC4.03□□□□□ -1.76
CFTRP13569 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.03□□□□□ -1.76
CFTRP13569 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CFTRP13569 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.03□□□□□ -1.76
CFTRP13569 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.03□□□□□ -1.76
CFTRP13569 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.03□□□□□ -1.76
CFTRP13569 FRG1DP-201ENST00000635586 771 ntBASIC4.03□□□□□ -1.76
CFTRP13569 MIR7153-201ENST00000637758 57 ntBASIC4.03□□□□□ -1.76
CFTRP13569 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CFTRP13569 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CFTRP13569 RANP7-201ENST00000418085 644 ntBASIC4.02□□□□□ -1.77
CFTRP13569 RN7SL297P-201ENST00000483161 293 ntBASIC4.02□□□□□ -1.77
CFTRP13569 AC116337.1-201ENST00000509680 687 ntBASIC4.02□□□□□ -1.77
CFTRP13569 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.02□□□□□ -1.77
CFTRP13569 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CFTRP13569 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.02□□□□□ -1.77
CFTRP13569 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.02□□□□□ -1.77
CFTRP13569 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.02□□□□□ -1.77
CFTRP13569 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.02□□□□□ -1.77
CFTRP13569 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CFTRP13569 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC4.01□□□□□ -1.77
CFTRP13569 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.01□□□□□ -1.77
CFTRP13569 RNA5SP88-201ENST00000365560 109 ntBASIC4.01□□□□□ -1.77
CFTRP13569 MIR137-201ENST00000385223 102 ntBASIC4.01□□□□□ -1.77
CFTRP13569 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms