Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.42□□□□□ -1.7
TOP3BO95985 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.42□□□□□ -1.7
TOP3BO95985 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.42□□□□□ -1.7
TOP3BO95985 AP001189.2-201ENST00000527320 189 ntBASIC4.42□□□□□ -1.7
TOP3BO95985 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.42□□□□□ -1.7
TOP3BO95985 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TOP3BO95985 AC069240.1-201ENST00000548774 375 ntBASIC4.42□□□□□ -1.7
TOP3BO95985 EEF1B2P4-201ENST00000551398 348 ntBASIC4.42□□□□□ -1.7
TOP3BO95985 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.42□□□□□ -1.7
TOP3BO95985 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.42□□□□□ -1.7
TOP3BO95985 AC125257.1-201ENST00000560400 2930 ntBASIC4.42□□□□□ -1.7
TOP3BO95985 AC009063.1-201ENST00000563342 702 ntBASIC4.42□□□□□ -1.7
TOP3BO95985 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.42□□□□□ -1.7
TOP3BO95985 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.42□□□□□ -1.7
TOP3BO95985 AC015813.4-201ENST00000610469 179 ntBASIC4.42□□□□□ -1.7
TOP3BO95985 AL589743.7-201ENST00000612637 233 ntBASIC4.42□□□□□ -1.7
TOP3BO95985 U4.5-201ENST00000617137 123 ntBASIC4.42□□□□□ -1.7
TOP3BO95985 AL357080.1-201ENST00000617394 239 ntBASIC4.42□□□□□ -1.7
TOP3BO95985 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.42□□□□□ -1.7
TOP3BO95985 AC009237.17-201ENST00000618111 748 ntBASIC4.42□□□□□ -1.7
TOP3BO95985 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.42□□□□□ -1.7
TOP3BO95985 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
TOP3BO95985 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
TOP3BO95985 AC039056.2-201ENST00000622261 511 ntBASIC4.42□□□□□ -1.7
TOP3BO95985 AC073348.1-201ENST00000623002 331 ntBASIC4.42□□□□□ -1.7
TOP3BO95985 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TOP3BO95985 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TOP3BO95985 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TOP3BO95985 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TOP3BO95985 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TOP3BO95985 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TOP3BO95985 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.42□□□□□ -1.7
TOP3BO95985 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TOP3BO95985 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.41□□□□□ -1.7
TOP3BO95985 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TOP3BO95985 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
TOP3BO95985 AC016716.1-201ENST00000265882 708 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TOP3BO95985 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TOP3BO95985 MIR383-201ENST00000362257 73 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 RNA5SP52-201ENST00000362448 134 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 RNU5D-1-201ENST00000363299 116 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP3BO95985 Y_RNA.390-201ENST00000383932 102 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 RNU6-1151P-201ENST00000384684 107 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TOP3BO95985 Z98745.1-201ENST00000402553 494 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 BTF3P7-201ENST00000407097 488 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 AL139098.1-201ENST00000407291 389 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.41□□□□□ -1.7
TOP3BO95985 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.41□□□□□ -1.7
TOP3BO95985 AC009965.2-201ENST00000425328 970 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 MTND4P28-201ENST00000426217 387 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 ISCA1P1-201ENST00000426679 387 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 NPM1P24-201ENST00000428039 894 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 LARP1BP3-201ENST00000437229 869 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP3BO95985 GEMIN8P3-201ENST00000445417 720 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 COX6CP12-201ENST00000446748 202 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 RPL23AP35-201ENST00000451906 501 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.41□□□□□ -1.7
TOP3BO95985 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.41□□□□□ -1.7
TOP3BO95985 AL132838.2-201ENST00000492041 314 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.41□□□□□ -1.7
TOP3BO95985 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
TOP3BO95985 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.41□□□□□ -1.7
TOP3BO95985 PPBPP1-201ENST00000510807 373 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP3BO95985 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.41□□□□□ -1.7
TOP3BO95985 RN7SKP244-201ENST00000516513 307 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 AF279873.1-201ENST00000523393 313 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.41□□□□□ -1.7
TOP3BO95985 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP3BO95985 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.41□□□□□ -1.7
TOP3BO95985 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP3BO95985 RPL23AP97-201ENST00000568955 471 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.41□□□□□ -1.7
TOP3BO95985 MIR6867-201ENST00000610636 67 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 AC025253.1-201ENST00000613623 543 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 AC138932.5-201ENST00000617759 563 ntBASIC4.41□□□□□ -1.7
TOP3BO95985 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
TOP3BO95985 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
TOP3BO95985 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.41□□□□□ -1.7
TOP3BO95985 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TOP3BO95985 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TOP3BO95985 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
TOP3BO95985 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TOP3BO95985 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
TOP3BO95985 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
TOP3BO95985 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.4□□□□□ -1.7
TOP3BO95985 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
TOP3BO95985 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.4□□□□□ -1.7
TOP3BO95985 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
TOP3BO95985 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
TOP3BO95985 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TOP3BO95985 RNA5SP307-201ENST00000362863 116 ntBASIC4.4□□□□□ -1.71
TOP3BO95985 RNU6-492P-201ENST00000363035 104 ntBASIC4.4□□□□□ -1.71
TOP3BO95985 RNU1-130P-201ENST00000363930 160 ntBASIC4.4□□□□□ -1.71
TOP3BO95985 RNU6-660P-201ENST00000364566 109 ntBASIC4.4□□□□□ -1.71
TOP3BO95985 Y_RNA.303-201ENST00000364998 94 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms