Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 RNU1-87P-201ENST00000363727 170 ntBASIC2.37□□□□□ -2.03
URB1O60287 RNU6-805P-201ENST00000365643 106 ntBASIC2.37□□□□□ -2.03
URB1O60287 HMGB1P48-201ENST00000446155 598 ntBASIC2.37□□□□□ -2.03
URB1O60287 HIGD1AP2-201ENST00000446367 280 ntBASIC2.37□□□□□ -2.03
URB1O60287 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.37□□□□□ -2.03
URB1O60287 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.37□□□□□ -2.03
URB1O60287 RPL21P41-201ENST00000459863 264 ntBASIC2.37□□□□□ -2.03
URB1O60287 AC091917.2-201ENST00000505002 744 ntBASIC2.37□□□□□ -2.03
URB1O60287 RNU6-964P-201ENST00000516524 69 ntBASIC2.37□□□□□ -2.03
URB1O60287 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.37□□□□□ -2.03
URB1O60287 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
URB1O60287 RNU6-984P-201ENST00000363236 109 ntBASIC2.36□□□□□ -2.03
URB1O60287 NPM1P49-201ENST00000448027 714 ntBASIC2.36□□□□□ -2.03
URB1O60287 AC118282.1-201ENST00000506408 765 ntBASIC2.36□□□□□ -2.03
URB1O60287 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.36□□□□□ -2.03
URB1O60287 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.36□□□□□ -2.03
URB1O60287 AP004247.3-201ENST00000608682 624 ntBASIC2.36□□□□□ -2.03
URB1O60287 AP002967.1-201ENST00000624203 539 ntBASIC2.36□□□□□ -2.03
URB1O60287 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
URB1O60287 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
URB1O60287 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
URB1O60287 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
URB1O60287 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.36□□□□□ -2.03
URB1O60287 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
URB1O60287 AP000526.1-201ENST00000603308 1388 ntBASIC2.35□□□□□ -2.03
URB1O60287 MIR137-201ENST00000385223 102 ntBASIC2.35□□□□□ -2.03
URB1O60287 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.35□□□□□ -2.03
URB1O60287 AC245291.1-201ENST00000419501 328 ntBASIC2.35□□□□□ -2.03
URB1O60287 AC048351.1-201ENST00000420064 602 ntBASIC2.35□□□□□ -2.03
URB1O60287 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.35□□□□□ -2.03
URB1O60287 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.35□□□□□ -2.03
URB1O60287 HMGB1P15-201ENST00000453854 435 ntBASIC2.35□□□□□ -2.03
URB1O60287 RPL23AP45-201ENST00000476406 468 ntBASIC2.35□□□□□ -2.03
URB1O60287 AP004217.1-201ENST00000480579 346 ntBASIC2.35□□□□□ -2.03
URB1O60287 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
URB1O60287 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
URB1O60287 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.35□□□□□ -2.03
URB1O60287 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
URB1O60287 RPL23AP84-201ENST00000571193 464 ntBASIC2.35□□□□□ -2.03
URB1O60287 AL139286.1-201ENST00000604465 483 ntBASIC2.35□□□□□ -2.03
URB1O60287 MIR6873-201ENST00000622788 63 ntBASIC2.35□□□□□ -2.03
URB1O60287 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
URB1O60287 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.35□□□□□ -2.03
URB1O60287 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
URB1O60287 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
URB1O60287 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.35□□□□□ -2.03
URB1O60287 HMGB3P23-201ENST00000414981 585 ntBASIC2.35□□□□□ -2.03
URB1O60287 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.35□□□□□ -2.03
URB1O60287 RPL7P10-201ENST00000417407 739 ntBASIC2.35□□□□□ -2.03
URB1O60287 AL592045.1-201ENST00000429867 352 ntBASIC2.35□□□□□ -2.03
URB1O60287 RPL23AP31-201ENST00000456160 467 ntBASIC2.35□□□□□ -2.03
URB1O60287 RN7SKP210-201ENST00000459176 261 ntBASIC2.35□□□□□ -2.03
URB1O60287 RPL30P9-201ENST00000465586 330 ntBASIC2.35□□□□□ -2.03
URB1O60287 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.35□□□□□ -2.03
URB1O60287 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.35□□□□□ -2.03
URB1O60287 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.35□□□□□ -2.03
URB1O60287 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
URB1O60287 AC112673.1-201ENST00000513168 575 ntBASIC2.35□□□□□ -2.03
URB1O60287 RN7SKP24-201ENST00000515888 284 ntBASIC2.35□□□□□ -2.03
URB1O60287 AC107918.3-201ENST00000533272 382 ntBASIC2.35□□□□□ -2.03
URB1O60287 MIR4498-201ENST00000577599 66 ntBASIC2.35□□□□□ -2.03
URB1O60287 AC103810.6-201ENST00000606708 136 ntBASIC2.35□□□□□ -2.03
URB1O60287 AC104237.2-201ENST00000612456 443 ntBASIC2.35□□□□□ -2.03
URB1O60287 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
URB1O60287 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
URB1O60287 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
URB1O60287 Y_RNA.338-201ENST00000365320 114 ntBASIC2.34□□□□□ -2.03
URB1O60287 RN7SKP32-201ENST00000410167 303 ntBASIC2.34□□□□□ -2.03
URB1O60287 RWDD4P2-201ENST00000426392 563 ntBASIC2.34□□□□□ -2.03
URB1O60287 RPS6P12-201ENST00000432491 726 ntBASIC2.34□□□□□ -2.03
URB1O60287 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.34□□□□□ -2.03
URB1O60287 RN7SL75P-201ENST00000461926 281 ntBASIC2.34□□□□□ -2.03
URB1O60287 RPS27P29-201ENST00000463110 252 ntBASIC2.34□□□□□ -2.03
URB1O60287 RWDD4P1-201ENST00000488019 565 ntBASIC2.34□□□□□ -2.03
URB1O60287 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.34□□□□□ -2.03
URB1O60287 RN7SKP219-201ENST00000516825 296 ntBASIC2.34□□□□□ -2.03
URB1O60287 RNA5SP380-201ENST00000517190 98 ntBASIC2.34□□□□□ -2.03
URB1O60287 AC061975.8-201ENST00000587058 721 ntBASIC2.34□□□□□ -2.03
URB1O60287 AC004696.1-201ENST00000614345 607 ntBASIC2.34□□□□□ -2.03
URB1O60287 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
URB1O60287 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.34□□□□□ -2.03
URB1O60287 Y_RNA.118-201ENST00000363300 101 ntBASIC2.34□□□□□ -2.04
URB1O60287 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.34□□□□□ -2.04
URB1O60287 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.34□□□□□ -2.04
URB1O60287 BTG3P1-201ENST00000435859 716 ntBASIC2.34□□□□□ -2.04
URB1O60287 MTND6P18-201ENST00000439477 513 ntBASIC2.34□□□□□ -2.04
URB1O60287 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.34□□□□□ -2.04
URB1O60287 AC107015.1-201ENST00000466902 747 ntBASIC2.34□□□□□ -2.04
URB1O60287 GAPDHP39-201ENST00000481866 979 ntBASIC2.34□□□□□ -2.04
URB1O60287 AC008121.2-201ENST00000614647 523 ntBASIC2.34□□□□□ -2.04
URB1O60287 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
URB1O60287 PISRT1-201ENST00000626175 531 ntBASIC2.34□□□□□ -2.04
URB1O60287 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.34□□□□□ -2.04
URB1O60287 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
URB1O60287 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
URB1O60287 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
URB1O60287 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
URB1O60287 EIF5P1-201ENST00000400019 1231 ntBASIC2.33□□□□□ -2.04
URB1O60287 AL121882.1-201ENST00000422893 417 ntBASIC2.33□□□□□ -2.04
URB1O60287 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms