Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 RNA5SP139-201ENST00000364340 117 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 SNORD3H-201ENST00000384486 214 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 RNA5SP252-201ENST00000391131 119 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 SSXP10-201ENST00000402595 565 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 U3.42-201ENST00000408746 214 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 RNU6-628P-201ENST00000410675 107 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.34□□□□□ -2.03
PDE6DO43924 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.34□□□□□ -2.03
PDE6DO43924 RPL36AP6-201ENST00000435770 321 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.34□□□□□ -2.03
PDE6DO43924 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.34□□□□□ -2.03
PDE6DO43924 AC091862.1-201ENST00000438016 1100 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 RPS29P6-201ENST00000438196 145 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC2.34□□□□□ -2.03
PDE6DO43924 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.34□□□□□ -2.03
PDE6DO43924 AP000852.1-201ENST00000472460 573 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 AC025518.1-201ENST00000479856 347 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 RPL30P14-201ENST00000482744 348 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 RN7SL297P-201ENST00000483161 293 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.34□□□□□ -2.03
PDE6DO43924 MTCO3P44-201ENST00000510977 541 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PDE6DO43924 RPPH1-2P-201ENST00000516688 293 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 AC026241.1-201ENST00000517873 2142 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.34□□□□□ -2.03
PDE6DO43924 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.34□□□□□ -2.03
PDE6DO43924 AC093014.1-201ENST00000548926 724 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.34□□□□□ -2.03
PDE6DO43924 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC2.34□□□□□ -2.03
PDE6DO43924 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PDE6DO43924 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.34□□□□□ -2.03
PDE6DO43924 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.34□□□□□ -2.03
PDE6DO43924 AC010620.2-201ENST00000600135 313 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 AC011374.2-201ENST00000607135 526 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.34□□□□□ -2.03
PDE6DO43924 AC024560.3-201ENST00000608482 349 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 AL161734.1-201ENST00000609720 557 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 AC005962.2-201ENST00000611427 652 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 MIR6862-1-201ENST00000613016 70 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 MIR6862-2-201ENST00000614755 70 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 MLECP1-201ENST00000615893 709 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 AC140725.3-201ENST00000616193 880 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 AC079228.1-201ENST00000624774 1049 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.34□□□□□ -2.03
PDE6DO43924 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.34□□□□□ -2.03
PDE6DO43924 FAM35BP-202ENST00000497389 3337 ntBASIC2.34□□□□□ -2.03
PDE6DO43924 ASNSP3-201ENST00000451989 1306 ntBASIC2.34□□□□□ -2.04
PDE6DO43924 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PDE6DO43924 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
PDE6DO43924 AL035425.3-201ENST00000564206 4996 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 CUL1P1-201ENST00000509510 2425 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PDE6DO43924 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.33□□□□□ -2.04
PDE6DO43924 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.33□□□□□ -2.04
PDE6DO43924 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.33□□□□□ -2.04
PDE6DO43924 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDE6DO43924 RNU4-35P-201ENST00000362588 141 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 RNU6-1249P-201ENST00000363237 111 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 RNA5SP283-201ENST00000365604 119 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDE6DO43924 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDE6DO43924 MIR592-201ENST00000384959 97 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.33□□□□□ -2.04
PDE6DO43924 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDE6DO43924 SNORA11.5-201ENST00000408163 128 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 AC092638.1-201ENST00000411966 1275 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.33□□□□□ -2.04
PDE6DO43924 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDE6DO43924 AC122718.1-201ENST00000439448 744 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 AC004865.1-201ENST00000442276 1003 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 AL590664.1-201ENST00000448065 339 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.33□□□□□ -2.04
PDE6DO43924 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.33□□□□□ -2.04
PDE6DO43924 RN7SL610P-201ENST00000463845 291 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 RPS29P2-201ENST00000479278 136 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 RPL9P33-201ENST00000484311 566 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PDE6DO43924 MTND3P24-201ENST00000506306 329 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 SNORA31.8-201ENST00000516327 108 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 SNORA9.3-201ENST00000516383 129 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 RN7SKP40-201ENST00000517211 242 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 RBM7-208ENST00000545678 867 ntTSL 3 BASIC2.33□□□□□ -2.04
PDE6DO43924 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.33□□□□□ -2.04
PDE6DO43924 AC009268.1-201ENST00000561352 1203 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 ZNF415P1-201ENST00000582279 1166 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.33□□□□□ -2.04
PDE6DO43924 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.33□□□□□ -2.04
PDE6DO43924 GLUD1P4-201ENST00000590914 418 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 RPL12P50-201ENST00000603116 116 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 AC090115.4-201ENST00000609970 188 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.33□□□□□ -2.04
PDE6DO43924 AC103798.2-201ENST00000624292 632 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 AL121594.5-201ENST00000631724 573 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PDE6DO43924 AC139713.2-210ENST00000641741 992 ntBASIC2.33□□□□□ -2.04
PDE6DO43924 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.33□□□□□ -2.04
PDE6DO43924 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDE6DO43924 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PDE6DO43924 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms