Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC073968.1-201ENST00000618594 637 ntBASIC3.79□□□□□ -1.8
TO15178 AC112200.1-201ENST00000625015 234 ntBASIC3.79□□□□□ -1.8
TO15178 AC103706.2-201ENST00000638080 240 ntBASIC3.79□□□□□ -1.8
TO15178 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TO15178 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TO15178 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.79□□□□□ -1.8
TO15178 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.78□□□□□ -1.8
TO15178 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TO15178 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.78□□□□□ -1.8
TO15178 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TO15178 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.78□□□□□ -1.8
TO15178 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.78□□□□□ -1.8
TO15178 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TO15178 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
TO15178 OR11H4-201ENST00000315409 1082 ntBASIC3.78□□□□□ -1.8
TO15178 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TO15178 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TO15178 RNU11-4P-201ENST00000391149 133 ntBASIC3.78□□□□□ -1.8
TO15178 MTND4LP20-201ENST00000402379 270 ntBASIC3.78□□□□□ -1.8
TO15178 AL022722.2-201ENST00000402519 180 ntBASIC3.78□□□□□ -1.8
TO15178 HMGB1P17-201ENST00000403495 628 ntBASIC3.78□□□□□ -1.8
TO15178 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.78□□□□□ -1.8
TO15178 RAB28P1-201ENST00000411517 641 ntBASIC3.78□□□□□ -1.8
TO15178 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.78□□□□□ -1.8
TO15178 PGBD4P8-201ENST00000412993 562 ntBASIC3.78□□□□□ -1.8
TO15178 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.78□□□□□ -1.8
TO15178 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.78□□□□□ -1.8
TO15178 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.78□□□□□ -1.8
TO15178 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.78□□□□□ -1.8
TO15178 AC012065.2-201ENST00000421295 375 ntBASIC3.78□□□□□ -1.8
TO15178 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.78□□□□□ -1.8
TO15178 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.78□□□□□ -1.8
TO15178 GSTA7P-201ENST00000438425 448 ntBASIC3.78□□□□□ -1.8
TO15178 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.78□□□□□ -1.8
TO15178 AC127537.2-201ENST00000439258 465 ntBASIC3.78□□□□□ -1.8
TO15178 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TO15178 MTND5P2-201ENST00000442927 1142 ntBASIC3.78□□□□□ -1.8
TO15178 MTCYBP3-201ENST00000445588 1137 ntBASIC3.78□□□□□ -1.8
TO15178 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.78□□□□□ -1.8
TO15178 RPL23AP35-201ENST00000451906 501 ntBASIC3.78□□□□□ -1.8
TO15178 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.78□□□□□ -1.8
TO15178 AC078785.3-201ENST00000476607 425 ntBASIC3.78□□□□□ -1.8
TO15178 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
TO15178 OR5H5P-201ENST00000503164 928 ntBASIC3.78□□□□□ -1.8
TO15178 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
TO15178 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.78□□□□□ -1.8
TO15178 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
TO15178 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.78□□□□□ -1.8
TO15178 HSPA8P13-201ENST00000523715 472 ntBASIC3.78□□□□□ -1.8
TO15178 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.78□□□□□ -1.8
TO15178 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.78□□□□□ -1.8
TO15178 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.78□□□□□ -1.8
TO15178 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.78□□□□□ -1.8
TO15178 CYCSP2-201ENST00000558168 301 ntBASIC3.78□□□□□ -1.8
TO15178 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.78□□□□□ -1.8
TO15178 ISCA1P3-201ENST00000577104 373 ntBASIC3.78□□□□□ -1.8
TO15178 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.78□□□□□ -1.8
TO15178 AC106791.2-201ENST00000604680 391 ntBASIC3.78□□□□□ -1.8
TO15178 AC114878.2-201ENST00000604863 1251 ntBASIC3.78□□□□□ -1.8
TO15178 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.78□□□□□ -1.8
TO15178 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.78□□□□□ -1.8
TO15178 AL360219.1-201ENST00000610230 366 ntBASIC3.78□□□□□ -1.8
TO15178 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TO15178 AL607023.1-201ENST00000620045 248 ntBASIC3.78□□□□□ -1.8
TO15178 MIR6810-201ENST00000622701 70 ntBASIC3.78□□□□□ -1.8
TO15178 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.78□□□□□ -1.8
TO15178 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TO15178 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TO15178 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
TO15178 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.78□□□□□ -1.8
TO15178 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TO15178 AP002907.1-201ENST00000606361 1430 ntBASIC3.78□□□□□ -1.8
TO15178 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
TO15178 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TO15178 AP000526.1-201ENST00000603308 1388 ntBASIC3.77□□□□□ -1.81
TO15178 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TO15178 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TO15178 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TO15178 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
TO15178 RNU6-335P-201ENST00000364563 113 ntBASIC3.77□□□□□ -1.81
TO15178 RNU6-1200P-201ENST00000384162 107 ntBASIC3.77□□□□□ -1.81
TO15178 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TO15178 AL590084.2-201ENST00000401481 382 ntBASIC3.77□□□□□ -1.81
TO15178 AL121972.1-201ENST00000402023 252 ntBASIC3.77□□□□□ -1.81
TO15178 RN7SKP56-201ENST00000410513 331 ntBASIC3.77□□□□□ -1.81
TO15178 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.77□□□□□ -1.81
TO15178 AL356095.1-201ENST00000417217 199 ntBASIC3.77□□□□□ -1.81
TO15178 AL953862.1-201ENST00000423016 168 ntBASIC3.77□□□□□ -1.81
TO15178 AC234781.2-201ENST00000426370 994 ntBASIC3.77□□□□□ -1.81
TO15178 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.77□□□□□ -1.81
TO15178 AL035407.1-201ENST00000429211 571 ntBASIC3.77□□□□□ -1.81
TO15178 AL358472.1-201ENST00000431295 329 ntBASIC3.77□□□□□ -1.81
TO15178 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.77□□□□□ -1.81
TO15178 ELOCP8-201ENST00000439309 332 ntBASIC3.77□□□□□ -1.81
TO15178 ELOCP15-201ENST00000442090 332 ntBASIC3.77□□□□□ -1.81
TO15178 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.77□□□□□ -1.81
TO15178 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.77□□□□□ -1.81
TO15178 AL606662.1-201ENST00000445763 553 ntBASIC3.77□□□□□ -1.81
TO15178 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.77□□□□□ -1.81
TO15178 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms