Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 DPH3P2-201ENST00000422618 250 ntBASIC4.76□□□□□ -1.65
CUX2O14529 RPL23AP4-201ENST00000427757 463 ntBASIC4.76□□□□□ -1.65
CUX2O14529 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.76□□□□□ -1.65
CUX2O14529 TRIM60P18-201ENST00000441518 828 ntBASIC4.76□□□□□ -1.65
CUX2O14529 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.76□□□□□ -1.65
CUX2O14529 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.76□□□□□ -1.65
CUX2O14529 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.76□□□□□ -1.65
CUX2O14529 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC4.76□□□□□ -1.65
CUX2O14529 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CUX2O14529 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CUX2O14529 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CUX2O14529 RNU1-87P-201ENST00000363727 170 ntBASIC4.75□□□□□ -1.65
CUX2O14529 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CUX2O14529 HMGB3P8-201ENST00000449709 577 ntBASIC4.75□□□□□ -1.65
CUX2O14529 PCNAP1-201ENST00000505363 709 ntBASIC4.75□□□□□ -1.65
CUX2O14529 RPS27AP18-201ENST00000515536 459 ntBASIC4.75□□□□□ -1.65
CUX2O14529 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.75□□□□□ -1.65
CUX2O14529 AC011492.1-201ENST00000600023 315 ntBASIC4.75□□□□□ -1.65
CUX2O14529 AC110741.2-201ENST00000605278 268 ntBASIC4.75□□□□□ -1.65
CUX2O14529 ELL2P4-201ENST00000446870 1376 ntBASIC4.75□□□□□ -1.65
CUX2O14529 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CUX2O14529 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.75□□□□□ -1.65
CUX2O14529 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.75□□□□□ -1.65
CUX2O14529 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CUX2O14529 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.75□□□□□ -1.65
CUX2O14529 AL590639.1-201ENST00000456484 337 ntBASIC4.75□□□□□ -1.65
CUX2O14529 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.75□□□□□ -1.65
CUX2O14529 RNA5SP282-201ENST00000516355 108 ntBASIC4.75□□□□□ -1.65
CUX2O14529 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.75□□□□□ -1.65
CUX2O14529 AC018630.1-201ENST00000541376 925 ntBASIC4.75□□□□□ -1.65
CUX2O14529 AC022884.3-201ENST00000579571 248 ntBASIC4.75□□□□□ -1.65
CUX2O14529 AC007621.1-201ENST00000604544 437 ntBASIC4.75□□□□□ -1.65
CUX2O14529 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CUX2O14529 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC4.74□□□□□ -1.65
CUX2O14529 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CUX2O14529 XPOTP1-201ENST00000443317 2398 ntBASIC4.74□□□□□ -1.65
CUX2O14529 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CUX2O14529 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CUX2O14529 Y_RNA.116-201ENST00000363292 103 ntBASIC4.74□□□□□ -1.65
CUX2O14529 RNU6-805P-201ENST00000365643 106 ntBASIC4.74□□□□□ -1.65
CUX2O14529 MT-TP-201ENST00000387461 68 ntBASIC4.74□□□□□ -1.65
CUX2O14529 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.74□□□□□ -1.65
CUX2O14529 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
CUX2O14529 AC093716.1-201ENST00000435923 377 ntBASIC4.74□□□□□ -1.65
CUX2O14529 RPS12P2-201ENST00000439728 269 ntBASIC4.74□□□□□ -1.65
CUX2O14529 RSL24D1P2-201ENST00000445584 366 ntBASIC4.74□□□□□ -1.65
CUX2O14529 AL162389.1-201ENST00000449233 177 ntBASIC4.74□□□□□ -1.65
CUX2O14529 RPL23AP15-201ENST00000450202 459 ntBASIC4.74□□□□□ -1.65
CUX2O14529 AC002553.2-201ENST00000453217 340 ntBASIC4.74□□□□□ -1.65
CUX2O14529 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.74□□□□□ -1.65
CUX2O14529 ST13P14-201ENST00000474095 734 ntBASIC4.74□□□□□ -1.65
CUX2O14529 AC021087.2-201ENST00000504656 1203 ntBASIC4.74□□□□□ -1.65
CUX2O14529 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CUX2O14529 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
CUX2O14529 FABP5P12-201ENST00000515543 389 ntBASIC4.74□□□□□ -1.65
CUX2O14529 RNA5SP217-201ENST00000515959 91 ntBASIC4.74□□□□□ -1.65
CUX2O14529 AC067904.2-201ENST00000517322 1283 ntBASIC4.74□□□□□ -1.65
CUX2O14529 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.74□□□□□ -1.65
CUX2O14529 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.74□□□□□ -1.65
CUX2O14529 AC005021.1-201ENST00000608730 355 ntBASIC4.74□□□□□ -1.65
CUX2O14529 AL591516.1-201ENST00000611326 274 ntBASIC4.74□□□□□ -1.65
CUX2O14529 MIR8070-201ENST00000616510 88 ntBASIC4.74□□□□□ -1.65
CUX2O14529 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CUX2O14529 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC4.73□□□□□ -1.65
CUX2O14529 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.73□□□□□ -1.65
CUX2O14529 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CUX2O14529 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.73□□□□□ -1.65
CUX2O14529 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CUX2O14529 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CUX2O14529 Y_RNA.140-201ENST00000363474 103 ntBASIC4.73□□□□□ -1.65
CUX2O14529 AL356057.3-201ENST00000402607 340 ntBASIC4.73□□□□□ -1.65
CUX2O14529 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.73□□□□□ -1.65
CUX2O14529 RPS20P5-201ENST00000434808 360 ntBASIC4.73□□□□□ -1.65
CUX2O14529 MTCYBP29-201ENST00000436327 1006 ntBASIC4.73□□□□□ -1.65
CUX2O14529 RN7SKP210-201ENST00000459176 261 ntBASIC4.73□□□□□ -1.65
CUX2O14529 EIF2S2P4-201ENST00000461070 984 ntBASIC4.73□□□□□ -1.65
CUX2O14529 RPL30P9-201ENST00000465586 330 ntBASIC4.73□□□□□ -1.65
CUX2O14529 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.73□□□□□ -1.65
CUX2O14529 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.73□□□□□ -1.65
CUX2O14529 AL137072.1-201ENST00000603444 466 ntBASIC4.73□□□□□ -1.65
CUX2O14529 VN1R9P-201ENST00000614184 867 ntBASIC4.73□□□□□ -1.65
CUX2O14529 AC079228.1-201ENST00000624774 1049 ntBASIC4.73□□□□□ -1.65
CUX2O14529 AC110792.3-201ENST00000595906 1614 ntBASIC4.73□□□□□ -1.65
CUX2O14529 AC022336.2-201ENST00000568966 2538 ntBASIC4.73□□□□□ -1.65
CUX2O14529 U3.11-201ENST00000364476 212 ntBASIC4.72□□□□□ -1.65
CUX2O14529 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.72□□□□□ -1.65
CUX2O14529 EI24P2-201ENST00000397776 1076 ntBASIC4.72□□□□□ -1.65
CUX2O14529 GSTA12P-201ENST00000402398 508 ntBASIC4.72□□□□□ -1.65
CUX2O14529 AL583834.1-201ENST00000406943 343 ntBASIC4.72□□□□□ -1.65
CUX2O14529 AL356806.1-201ENST00000422524 916 ntBASIC4.72□□□□□ -1.65
CUX2O14529 FAR1P1-201ENST00000427163 934 ntBASIC4.72□□□□□ -1.65
CUX2O14529 HMGB3P6-201ENST00000444896 598 ntBASIC4.72□□□□□ -1.65
CUX2O14529 snoU13.18-201ENST00000459483 104 ntBASIC4.72□□□□□ -1.65
CUX2O14529 OR5H3P-201ENST00000502817 919 ntBASIC4.72□□□□□ -1.65
CUX2O14529 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CUX2O14529 AC005351.1-201ENST00000511152 786 ntBASIC4.72□□□□□ -1.65
CUX2O14529 SNORA48.9-201ENST00000516419 162 ntBASIC4.72□□□□□ -1.65
CUX2O14529 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.72□□□□□ -1.65
CUX2O14529 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC4.72□□□□□ -1.65
CUX2O14529 AC073111.2-201ENST00000605657 1075 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms