Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
UPK1AO00322 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.85□□□□□ -1.95
UPK1AO00322 ASNSP3-201ENST00000451989 1306 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 MTND5P1-201ENST00000445440 1375 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
UPK1AO00322 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
UPK1AO00322 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
UPK1AO00322 MTCO1P18-201ENST00000455518 1419 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.85□□□□□ -1.95
UPK1AO00322 AC118273.1-201ENST00000525324 3006 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.84□□□□□ -1.95
UPK1AO00322 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
UPK1AO00322 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.84□□□□□ -1.95
UPK1AO00322 AL353746.1-201ENST00000566293 6881 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
UPK1AO00322 RNU6-252P-201ENST00000363232 107 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
UPK1AO00322 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
UPK1AO00322 RNA5SP274-201ENST00000410484 108 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.84□□□□□ -1.95
UPK1AO00322 EI24P1-201ENST00000416584 867 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.84□□□□□ -1.95
UPK1AO00322 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.84□□□□□ -1.95
UPK1AO00322 UBE2V1P1-201ENST00000430836 445 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 AC005189.1-201ENST00000431286 310 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 RPL21P112-201ENST00000434403 463 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.84□□□□□ -1.95
UPK1AO00322 AC004865.1-201ENST00000442276 1003 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.84□□□□□ -1.95
UPK1AO00322 AC025181.1-201ENST00000477507 416 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.84□□□□□ -1.95
UPK1AO00322 TMEM248P1-201ENST00000510579 951 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 AC083923.1-201ENST00000523708 376 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.84□□□□□ -1.95
UPK1AO00322 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.84□□□□□ -1.95
UPK1AO00322 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
UPK1AO00322 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.84□□□□□ -1.95
UPK1AO00322 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.84□□□□□ -1.95
UPK1AO00322 AC090616.5-202ENST00000582111 297 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 AC007566.2-201ENST00000603642 413 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 AC100814.1-201ENST00000606963 623 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 AC004775.1-201ENST00000607389 753 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 AL392048.1-201ENST00000613946 534 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 AC104307.1-201ENST00000616142 196 ntBASIC2.84□□□□□ -1.95
UPK1AO00322 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.84□□□□□ -1.95
UPK1AO00322 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
UPK1AO00322 OR5BR1P-201ENST00000524992 1330 ntBASIC2.84□□□□□ -1.96
UPK1AO00322 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.84□□□□□ -1.96
UPK1AO00322 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
UPK1AO00322 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.96
UPK1AO00322 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
UPK1AO00322 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.83□□□□□ -1.96
UPK1AO00322 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.83□□□□□ -1.96
UPK1AO00322 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
UPK1AO00322 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
UPK1AO00322 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
UPK1AO00322 MIR22-201ENST00000362190 85 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 SNORA38.1-201ENST00000364172 131 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 SNORA54-201ENST00000384281 123 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
UPK1AO00322 DSTNP4-201ENST00000399472 474 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 GSTA8P-201ENST00000404253 637 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 MTCYBP24-201ENST00000420387 1106 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.83□□□□□ -1.96
UPK1AO00322 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
UPK1AO00322 VDAC1P3-201ENST00000434069 851 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.83□□□□□ -1.96
UPK1AO00322 HMGB1P45-201ENST00000435986 653 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.83□□□□□ -1.96
UPK1AO00322 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.83□□□□□ -1.96
UPK1AO00322 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.83□□□□□ -1.96
UPK1AO00322 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.83□□□□□ -1.96
UPK1AO00322 BX510359.1-201ENST00000456973 237 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 RPS3AP43-201ENST00000479743 781 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 AC006445.1-201ENST00000491925 405 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.83□□□□□ -1.96
UPK1AO00322 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
UPK1AO00322 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.83□□□□□ -1.96
UPK1AO00322 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.83□□□□□ -1.96
UPK1AO00322 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.83□□□□□ -1.96
UPK1AO00322 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
UPK1AO00322 AC008885.2-201ENST00000509506 930 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 AC104108.1-201ENST00000509930 412 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 AC103833.1-201ENST00000517442 172 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.83□□□□□ -1.96
UPK1AO00322 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.83□□□□□ -1.96
UPK1AO00322 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.83□□□□□ -1.96
UPK1AO00322 AC124312.4-201ENST00000605533 310 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 AC107871.2-201ENST00000612894 502 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 AL162574.2-201ENST00000614618 657 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 AC007318.2-201ENST00000620999 243 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 AC004777.1-201ENST00000624317 287 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
UPK1AO00322 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
UPK1AO00322 SEC63P2-201ENST00000503863 1939 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 AL079305.1-201ENST00000623159 3008 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 AL035425.3-201ENST00000564206 4996 ntBASIC2.83□□□□□ -1.96
UPK1AO00322 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms