Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC010198.2-201ENST00000550612 259 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AL512347.1-201ENST00000566420 503 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC053481.3-201ENST00000577881 843 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC061975.8-201ENST00000587058 721 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 BNIP3P24-201ENST00000593398 557 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC026790.2-201ENST00000606282 430 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AP003392.5-201ENST00000607857 415 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AL121772.2-201ENST00000614331 297 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC138649.5-201ENST00000637456 137 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AP002907.1-201ENST00000606361 1430 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AP000568.1-201ENST00000282964 442 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 RNA5SP167-201ENST00000365461 116 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 MIR93-201ENST00000385024 80 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AL583834.1-201ENST00000406943 343 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 SNORA3.3-201ENST00000408712 125 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AC012065.2-201ENST00000421295 375 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AL139421.1-201ENST00000423010 169 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AC087650.1-201ENST00000431445 468 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 MTCO2P20-201ENST00000437339 673 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 HMGB1P37-201ENST00000439613 609 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 NOTCH2P1-201ENST00000443481 624 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 TRGVB-201ENST00000453257 471 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 OFD1P3Y-201ENST00000453312 783 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 RPL18AP17-201ENST00000455326 198 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 snoU13.3-201ENST00000459441 104 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 RPL7P38-201ENST00000488396 739 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 XKRY-201ENST00000510392 1100 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 RNU6-352P-201ENST00000516908 107 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 OR4P1P-201ENST00000530808 1136 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 MIR4444-1-201ENST00000581696 74 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 MIR4637-201ENST00000582405 84 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 MIR4444-2-201ENST00000584390 74 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AC010928.3-201ENST00000587712 541 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 SNRPGP15-201ENST00000600149 222 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AC234772.3-201ENST00000602277 528 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AC009220.3-201ENST00000604318 586 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AL355816.2-201ENST00000610049 647 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 MIR4278-201ENST00000636094 69 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 AP004289.2-201ENST00000444413 1457 ntBASIC3.54□□□□□ -1.84
NPIPA3F8WFD2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 OR5BR1P-201ENST00000524992 1330 ntBASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NPIPA3F8WFD2 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms