Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC091925.2-201ENST00000625059 256 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 Y_RNA.148-201ENST00000363557 117 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 SNORD116-11-201ENST00000383882 92 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 RNU6-601P-201ENST00000384540 107 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 CISD1P1-201ENST00000393907 327 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 SOD2P1-201ENST00000396543 562 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AL109755.1-201ENST00000401791 649 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 Y_RNA.605-201ENST00000410577 105 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC114491.1-201ENST00000416095 246 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 RPS15AP40-201ENST00000419621 391 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 RPL31P12-201ENST00000422587 358 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 SNAP23P1-201ENST00000433229 246 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 CYCSP12-201ENST00000437729 300 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AL353662.1-201ENST00000439099 327 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AL035666.1-201ENST00000446195 348 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 EEF1B2P3-201ENST00000447718 678 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 BTF3P15-201ENST00000455606 336 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 NXT1P1-201ENST00000458481 316 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 RPL21P8-201ENST00000465083 535 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 HIGD1AP13-201ENST00000509878 289 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC100870.1-201ENST00000522035 505 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AP003122.3-201ENST00000526316 255 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC135001.1-201ENST00000544546 283 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 MIR4503-201ENST00000582187 83 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 MIR3149-201ENST00000584629 83 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 COX6CP7-201ENST00000597056 208 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AL670379.11-201ENST00000604059 253 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AL670379.10-201ENST00000604330 253 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AL670379.12-201ENST00000605291 253 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AL670379.9-201ENST00000605428 253 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 MIR6809-201ENST00000612189 116 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC083806.3-201ENST00000614016 455 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 uc_338.29-201ENST00000615099 168 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC090510.2-201ENST00000617465 629 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 MIR6806-201ENST00000622141 64 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC022418.1-201ENST00000624118 445 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 AC010325.3-201ENST00000641084 394 ntBASIC4.89□□□□□ -1.63
SHISA3A0PJX4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.89□□□□□ -1.63
SHISA3A0PJX4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 Y_RNA.135-201ENST00000363439 95 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 Y_RNA.158-201ENST00000363651 101 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 RNU6-188P-201ENST00000364207 107 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.88□□□□□ -1.63
SHISA3A0PJX4 RNU6-754P-201ENST00000391166 107 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 AL031985.1-201ENST00000392713 418 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 ENSAP1-201ENST00000392855 326 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 MIR548F4-201ENST00000408515 105 ntBASIC4.88□□□□□ -1.63
SHISA3A0PJX4 RNU6-985P-201ENST00000410182 104 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms