Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RPL23AP71-201ENST00000470966 469 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 RPS3AP17-201ENST00000472594 777 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC105252.1-201ENST00000503089 286 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 RN7SKP283-201ENST00000517197 270 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 OR6C73P-201ENST00000546432 358 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC093519.1-201ENST00000566109 298 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC136618.2-201ENST00000575091 400 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC010680.3-201ENST00000604215 520 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC072046.2-201ENST00000618366 268 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC243756.2-201ENST00000618406 463 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC022140.2-201ENST00000623500 188 ntBASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CTDP1Q9Y5B0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AC134882.1-201ENST00000603738 1676 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 Y_RNA.303-201ENST00000364998 94 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 RNU4-12P-201ENST00000365233 139 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 SNORA40.3-201ENST00000390964 122 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 SNORD115-47-201ENST00000391226 86 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 RNU6-272P-201ENST00000411028 104 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AIMP1P1-201ENST00000418670 937 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AL031736.2-201ENST00000426573 787 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 ACTR3P2-201ENST00000439585 1257 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 BTF3P6-201ENST00000448054 499 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 NUTF2P3-201ENST00000448540 384 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AL121769.1-201ENST00000469473 401 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AC022483.1-201ENST00000514020 567 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 SNORA48.10-201ENST00000516965 160 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 HIGD1AP6-201ENST00000521833 279 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 COX6B1P6-201ENST00000522347 255 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AP002748.2-201ENST00000528671 348 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AL121579.1-201ENST00000555129 305 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AC006960.3-201ENST00000561845 705 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AC091489.2-201ENST00000566263 604 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AC067852.4-201ENST00000590314 478 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AC017083.3-201ENST00000609955 700 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AC015914.2-201ENST00000618167 288 ntBASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CTDP1Q9Y5B0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 ZNF37BP-203ENST00000452306 1352 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 MTCO1P14-201ENST00000441695 1559 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 RNU5E-5P-201ENST00000365379 116 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC025750.1-201ENST00000399891 379 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 USP9YP13-201ENST00000417797 480 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 RPL17P36-201ENST00000420302 549 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 RPS27AP14-201ENST00000422868 454 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 MTND4P28-201ENST00000426217 387 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 B3GNT2P1-201ENST00000434960 952 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 RPS3AP54-201ENST00000435535 734 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 MTATP6P30-201ENST00000443540 664 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 RPL23AP43-201ENST00000446445 471 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 NDUFA5P7-201ENST00000452914 242 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 RPL37P3-201ENST00000456825 293 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms