Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC084035.1-201ENST00000634543 607 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 ZNF37BP-203ENST00000452306 1352 ntBASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NCKIPSDQ9NZQ3 AC097504.1-201ENST00000515103 2415 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AL031985.3-201ENST00000565390 2449 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC011477.1-204ENST00000623416 1325 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AL158163.1-201ENST00000603915 1649 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 RNU4-21P-201ENST00000362802 126 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 RNU6-216P-201ENST00000363282 104 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 ATP5F1P4-201ENST00000397288 746 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 SNRPEP2-201ENST00000397592 279 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC097374.1-203ENST00000400783 485 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 RNA5SP317-201ENST00000410176 116 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 RNA5SP311-201ENST00000411290 116 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC108032.1-201ENST00000416706 207 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AL161631.1-201ENST00000417933 486 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 BTF3P10-201ENST00000433415 495 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AL590103.1-201ENST00000434488 307 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 MTND4P6-201ENST00000438297 472 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 MTCO1P19-201ENST00000443487 500 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 TRBV26-201ENST00000456572 344 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 RPL7P22-201ENST00000466005 733 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 RPL7P1-201ENST00000468161 747 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 RPL7P9-201ENST00000468715 747 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC109486.1-201ENST00000486833 374 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC108145.1-201ENST00000503770 153 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC008958.1-201ENST00000511047 682 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC011352.1-201ENST00000512300 793 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 RNA5SP315-201ENST00000516340 116 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 Y_RNA.695-201ENST00000516715 107 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 RNU6-678P-201ENST00000516832 109 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 RNA5SP312-201ENST00000517068 116 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 OR7K1P-201ENST00000546439 926 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC007954.1-201ENST00000554198 494 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 TVP23BP1-201ENST00000557500 617 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AL512347.1-201ENST00000566420 503 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC073544.2-201ENST00000601155 540 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 YWHAQP7-201ENST00000603536 658 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC007566.2-201ENST00000603642 413 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AL591034.3-201ENST00000605511 685 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC087752.4-201ENST00000605911 462 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AP006248.2-201ENST00000623309 592 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC092656.1-203ENST00000624134 423 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC112484.5-201ENST00000624189 228 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC092192.1-201ENST00000633154 1018 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 MIR4496-201ENST00000635896 61 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 AC090582.1-201ENST00000636321 199 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 LARP1BP1-201ENST00000506036 1359 ntBASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NCKIPSDQ9NZQ3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 RNU1-13P-201ENST00000384499 162 ntBASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 Y_RNA.553-201ENST00000384670 102 ntBASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 Y_RNA.559-201ENST00000384686 107 ntBASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 ENSAP1-201ENST00000392855 326 ntBASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 PPIAP31-201ENST00000405422 495 ntBASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 TPMTP3-201ENST00000411928 735 ntBASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 RPL7P8-201ENST00000411964 730 ntBASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 MTCO1P21-201ENST00000416634 589 ntBASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 AL139095.3-201ENST00000419672 1203 ntBASIC4.25□□□□□ -1.73
NCKIPSDQ9NZQ3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms