Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AC011978.2-201ENST00000569835 2054 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 HSPA8P14-201ENST00000552265 1805 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AC011460.1-201ENST00000636268 1834 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 MTND5P6-201ENST00000422338 1798 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RNU6-28P-201ENST00000362378 107 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 Y_RNA.20-201ENST00000362479 113 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RNU1-49P-201ENST00000363468 159 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RNU5A-8P-201ENST00000364102 114 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 Y_RNA.222-201ENST00000364264 102 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RNA5SP240-201ENST00000365355 128 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RNU6-128P-201ENST00000383976 107 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 SNORA51.6-201ENST00000384151 125 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 ARF4P3-201ENST00000397387 509 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RNU2-21P-201ENST00000410368 188 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AL035422.1-201ENST00000414193 397 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RPL36AP36-201ENST00000418616 301 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AC007568.1-201ENST00000422912 471 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RPSAP65-201ENST00000429660 595 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AL132765.1-201ENST00000434165 553 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AL645936.1-201ENST00000441979 518 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AC013470.1-201ENST00000453438 462 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AL353752.1-201ENST00000454946 260 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 PCMTD1P1-201ENST00000455560 355 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AL445687.2-201ENST00000458156 728 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AC068228.1-201ENST00000461723 211 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RN7SL177P-201ENST00000476596 299 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AC006539.1-201ENST00000481419 501 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AC022215.1-201ENST00000481770 362 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 HMGB1P21-201ENST00000502313 581 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 HMGB1P35-201ENST00000503360 598 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 FTH1P21-201ENST00000512179 511 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RN7SKP67-201ENST00000515905 235 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RNU7-51P-201ENST00000516560 62 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AP001858.2-201ENST00000536213 601 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AC051619.2-201ENST00000559063 397 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 MIR3133-201ENST00000583157 78 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AC005899.2-201ENST00000584353 90 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AC004792.1-201ENST00000614523 137 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AL357559.1-201ENST00000622228 274 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AL445363.3-201ENST00000623080 671 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AL159972.1-201ENST00000625150 448 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AL596275.2-204ENST00000641628 552 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 AL596275.2-206ENST00000641957 626 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 SOCS5P3-201ENST00000425115 1576 ntBASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.01□□□□□ -1.45
CUEDC1Q9NWM3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 COX6B1P3-201ENST00000312310 260 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 RNU6-179P-201ENST00000363350 107 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 SNORA43.1-201ENST00000364863 140 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 U3.20-201ENST00000390909 217 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 RNU2-71P-201ENST00000411395 189 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 RBMY1KP-201ENST00000423480 476 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 RPL36AP6-201ENST00000435770 321 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 AC098831.1-201ENST00000440661 216 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 TMSB4XP3-201ENST00000445144 114 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 CBX1P2-201ENST00000453841 458 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 AC133473.1-201ENST00000455173 299 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 RPS3AP41-201ENST00000462701 778 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 LSM3P4-201ENST00000502948 309 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms