Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RN7SL558P-201ENST00000497468 299 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 RNU6-445P-201ENST00000516949 107 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 Y_RNA.719-201ENST00000517156 106 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AP003181.2-201ENST00000528941 181 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AC005868.1-201ENST00000536421 331 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AL389895.1-201ENST00000554127 252 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AC107954.1-201ENST00000565906 727 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 RN7SL802P-201ENST00000577858 299 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 MIR5699-201ENST00000578903 90 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AC022726.1-201ENST00000587475 207 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AC005498.1-201ENST00000592125 465 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 VN1R85P-201ENST00000601587 426 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AL162413.1-201ENST00000603198 110 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AL121932.1-201ENST00000605542 214 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AC093788.1-201ENST00000609356 927 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AL161734.1-201ENST00000609720 557 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AC015908.5-201ENST00000623289 343 ntBASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM7Q9NR12 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 RNU1-85P-201ENST00000364127 164 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 RNU6-282P-201ENST00000365357 103 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 Y_RNA.481-201ENST00000384373 102 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 RNU6-692P-201ENST00000384496 107 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 RNU6-878P-201ENST00000384578 110 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 RNU6-908P-201ENST00000410160 94 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AF228730.4-201ENST00000421457 183 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AC010881.1-201ENST00000433830 235 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 HMGB3P12-201ENST00000438745 556 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 CBX1P1-201ENST00000440184 427 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 CALM1P1-201ENST00000442082 433 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AC114967.1-201ENST00000504890 259 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AC034159.1-201ENST00000513885 583 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AC008687.2-201ENST00000597865 520 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 MIR98-201ENST00000606724 119 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AC009237.17-201ENST00000618111 748 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AC090574.1-201ENST00000623186 233 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AC009643.2-201ENST00000603543 1448 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 AC004656.1-201ENST00000568479 4951 ntBASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM7Q9NR12 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 AC073136.1-201ENST00000449426 2884 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 SNORA63-201ENST00000363450 132 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 RNA5SP28-201ENST00000363841 119 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 RPS20P2-201ENST00000402520 389 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 RPL31P52-201ENST00000407532 367 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 SNRPEP10-201ENST00000420249 274 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 UQCRBP1-201ENST00000421129 336 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms