Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 SNORD17-201ENST00000390930 237 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 LIPT1P1-201ENST00000415870 1186 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 OR1AA1P-201ENST00000419597 916 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AC006548.1-201ENST00000427470 102 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AL590762.3-201ENST00000436372 640 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AC115115.1-201ENST00000449927 248 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 HMGN2P13-201ENST00000476476 274 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 RPS29P2-201ENST00000479278 136 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 MTND4LP22-201ENST00000508209 276 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 PCBP2P3-201ENST00000509726 843 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 GMPSP1-201ENST00000514075 579 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AL389895.1-201ENST00000554127 252 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 OR4H6P-202ENST00000603819 340 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 BNIP3P4-201ENST00000604946 565 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AC128687.1-201ENST00000605304 619 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AL365400.2-201ENST00000605604 902 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AL021368.1-201ENST00000607490 540 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 AC021851.1-201ENST00000608537 1082 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 CR381572.1-201ENST00000625098 102 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.52□□□□□ -1.85
TM9SF3Q9HD45 MTND4P21-201ENST00000453886 1357 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 AC110774.1-201ENST00000623567 2018 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 RNA5SP258-201ENST00000362750 119 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 SNORA48.8-201ENST00000391324 134 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 UBE2V1P15-201ENST00000407776 448 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 RPF2P1-201ENST00000424137 906 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 MORF4L1P7-201ENST00000426038 703 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 FAR1P1-201ENST00000427163 934 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 MRPS18BP2-201ENST00000434310 759 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 NDUFB1P1-201ENST00000435191 180 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 AC004022.1-201ENST00000447766 1066 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 AC006539.3-201ENST00000454258 129 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 RPS23P3-201ENST00000470993 430 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 AC010301.1-201ENST00000473936 355 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 MTCO3P44-201ENST00000510977 541 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 SNORD84-203ENST00000584275 78 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 AP003355.3-201ENST00000623465 114 ntBASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF3Q9HD45 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 RNU6-1249P-201ENST00000363237 111 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 SNORA38.1-201ENST00000364172 131 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 RNU6-1005P-201ENST00000384519 107 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 RNU1-101P-201ENST00000391171 127 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 RPS3AP26-201ENST00000398259 784 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 ATF1P1-201ENST00000406040 927 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 AL354719.1-201ENST00000406535 843 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 AC109780.2-201ENST00000413467 845 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms