Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 AC090132.1-201ENST00000524071 1480 ntBASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SCAF1Q9H7N4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 AC139769.1-204ENST00000472297 1931 ntBASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 SNORD82-201ENST00000365530 70 ntBASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 TINAG-203ENST00000370869 782 ntTSL 3 BASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 AC018797.1-201ENST00000510791 255 ntBASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 ATP5F1P5-201ENST00000526403 760 ntBASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 AC005868.1-201ENST00000536421 331 ntBASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 RN7SL199P-201ENST00000578752 281 ntBASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 RN7SL656P-201ENST00000579044 281 ntBASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 RN7SL270P-201ENST00000579643 281 ntBASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 U47924.1-201ENST00000606539 434 ntBASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 MIR6721-201ENST00000617181 87 ntBASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 PFKM-232ENST00000629846 381 ntTSL 4 BASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 AL365440.1-201ENST00000436135 2167 ntBASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC10.24□□□□□ -0.77
SCAF1Q9H7N4 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 AC104581.5-201ENST00000624171 7141 ntBASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 MAPK10-357ENST00000641831 2858 ntBASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 Y_RNA.116-201ENST00000363292 103 ntBASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 AL138785.1-201ENST00000425821 331 ntBASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 AC234779.1-201ENST00000425910 285 ntBASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 BX323845.3-201ENST00000428215 527 ntBASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 RPL26P6-201ENST00000440913 438 ntBASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 NDUFA3P4-201ENST00000560814 250 ntBASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 AC109309.2-201ENST00000612597 332 ntBASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SCAF1Q9H7N4 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 RNU6-211P-201ENST00000384047 107 ntBASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 RN7SKP206-201ENST00000410823 293 ntBASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 RNU6-677P-201ENST00000516914 101 ntBASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 IGKV2D-38-201ENST00000518423 240 ntBASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 AL161420.1-201ENST00000619393 264 ntBASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 AC069528.2-201ENST00000624849 1991 ntBASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCAF1Q9H7N4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC10.21□□□□□ -0.77
SCAF1Q9H7N4 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SCAF1Q9H7N4 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SCAF1Q9H7N4 AC087516.1-201ENST00000561236 2428 ntBASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 RNA5SP308-201ENST00000362532 115 ntBASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 RNU1-5P-201ENST00000362684 144 ntBASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 RNU6-199P-201ENST00000362954 107 ntBASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 Y_RNA.217-201ENST00000364214 105 ntBASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 CTSL3P-202ENST00000412179 788 ntBASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 AC063976.4-201ENST00000421971 163 ntBASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 RPL21P40-201ENST00000428586 483 ntBASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 Y_RNA.641-201ENST00000459414 105 ntBASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 AC010631.1-201ENST00000474150 156 ntBASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC10.21□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms