Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 LRRC37A17P-201ENST00000570311 4693 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 AC005921.3-201ENST00000623774 2151 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 CARF-201ENST00000320443 5209 ntTSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 DDX3Y-202ENST00000360160 2709 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 ZFP1-202ENST00000393430 3250 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 AOX2P-204ENST00000487742 3284 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 CDHR3-211ENST00000478080 2633 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 OVGP1-201ENST00000369732 2243 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MAPK10-202ENST00000359221 2668 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC138409.1-201ENST00000505001 3598 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 METTL7A-201ENST00000332160 3390 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 KCNA2-203ENST00000485317 2496 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MCC-209ENST00000515367 3844 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 FIGNL1-206ENST00000433017 3626 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ATF7IP-221ENST00000543189 4887 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 KCNE1-206ENST00000432085 3184 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 TNRC6C-AS1-201ENST00000589217 3192 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SORBS1-201ENST00000277982 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AL590999.1-202ENST00000607215 3053 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC016251.2-201ENST00000623393 3089 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AL449283.1-201ENST00000602631 3403 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AL672167.1-203ENST00000641299 2975 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SEZ6L-204ENST00000402979 3306 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 CASC15-203ENST00000605917 4461 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 TTLL6-205ENST00000433608 2548 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ITPRIPL1-201ENST00000361124 4295 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 GPNMB-202ENST00000381990 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 IGFL3-201ENST00000341415 662 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RNU6-822P-201ENST00000362707 106 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RNU6-1210P-201ENST00000363775 107 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RNU1-7P-201ENST00000364105 164 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 S100A8-201ENST00000368732 495 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RNU6-1323P-201ENST00000384025 107 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SNORA51.6-201ENST00000384151 125 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SNORA29-201ENST00000384183 140 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 Y_RNA.486-201ENST00000384398 107 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MIR487A-201ENST00000385009 80 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MIR660-201ENST00000385235 97 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SNORD77.3-201ENST00000391113 65 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC016769.3-201ENST00000396562 315 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SNORD111B-201ENST00000408587 80 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RNU6-602P-201ENST00000411155 105 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms