Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.78□□□□□ -1.64
LRFN3Q9BTN0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN3Q9BTN0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN3Q9BTN0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN3Q9BTN0 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN3Q9BTN0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN3Q9BTN0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
LRFN3Q9BTN0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LRFN3Q9BTN0 ZNF137P-201ENST00000456718 1920 ntBASIC4.78□□□□□ -1.64
LRFN3Q9BTN0 BTBD10P1-201ENST00000549824 1352 ntBASIC4.78□□□□□ -1.64
LRFN3Q9BTN0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AL161781.1-201ENST00000354277 403 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 Y_RNA.813-201ENST00000364639 102 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 RNU6-730P-201ENST00000383954 104 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 SNORA70E-201ENST00000384492 135 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AL357515.1-201ENST00000402967 542 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 RPS7P13-201ENST00000413955 498 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 TMSB10P2-201ENST00000416049 131 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 OFD1P18Y-201ENST00000420889 959 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 USP9YP18-201ENST00000425912 695 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 HMGN2P27-201ENST00000427352 270 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 BX276092.6-201ENST00000430476 250 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AL445584.1-201ENST00000431451 330 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 SKP1P1-201ENST00000438081 489 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 GAPDHP14-201ENST00000450472 937 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 HMGB1P15-201ENST00000453854 435 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 BX276092.8-201ENST00000455722 250 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AP000797.1-201ENST00000478870 387 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 RNU1-6P-201ENST00000516290 144 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 RNU6-506P-201ENST00000516553 94 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 OR8Q1P-201ENST00000526467 655 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AP001646.1-201ENST00000527936 915 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AC024224.1-201ENST00000538284 609 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 OR6C73P-201ENST00000546432 358 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 MIR4458-201ENST00000578872 75 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 MIR5699-201ENST00000578903 90 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AC025588.3-201ENST00000604182 274 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 RNU4-89P-201ENST00000607443 133 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AC105429.2-201ENST00000610567 517 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AL589743.7-201ENST00000612637 233 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 NUP58P1-201ENST00000502546 1738 ntBASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LRFN3Q9BTN0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 PCAT14-202ENST00000627127 3935 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 RNU6-28P-201ENST00000362378 107 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 RNU6-1279P-201ENST00000383917 103 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 RPL31P1-201ENST00000398116 372 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AL356095.1-201ENST00000417217 199 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 RPL21P32-201ENST00000419877 477 ntBASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.76□□□□□ -1.65
LRFN3Q9BTN0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms