Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC104837.1-201ENST00000444644 1587 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 SNORD50.2-201ENST00000365465 70 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 RNU6-339P-201ENST00000384310 107 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 MIR578-201ENST00000384828 96 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 HSPE1P8-201ENST00000406997 288 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 RNU6-607P-201ENST00000411283 108 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 AC000089.1-201ENST00000424559 801 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 RN7SL834P-201ENST00000461450 286 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 RPS14P8-201ENST00000478778 369 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 RN7SL379P-201ENST00000479912 293 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 RPS4XP23-201ENST00000487801 237 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 SNRPCP11-201ENST00000492453 205 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 RPS24P16-201ENST00000497294 392 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 MIR5696-201ENST00000578474 85 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 RN7SL270P-201ENST00000579643 281 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 Z83818.1-201ENST00000603584 150 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 RPS4XP21-201ENST00000603814 750 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 AC015982.1-201ENST00000608113 465 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 MIR6130-201ENST00000619419 109 ntBASIC6.03□□□□□ -1.44
USB1Q9BQ65 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
USB1Q9BQ65 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USB1Q9BQ65 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USB1Q9BQ65 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USB1Q9BQ65 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 DLEU2L-201ENST00000371086 3555 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USB1Q9BQ65 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USB1Q9BQ65 RNU6-858P-201ENST00000362436 107 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 U3.13-201ENST00000364804 214 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 RNU6-81P-201ENST00000365608 104 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 ENSAP1-201ENST00000392855 326 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 AL033519.1-201ENST00000407266 307 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 MIR1266-201ENST00000408125 84 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 U3.35-201ENST00000408405 208 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 AL663061.1-201ENST00000416625 580 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 Z82198.3-201ENST00000421145 199 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 SPATA20P1-201ENST00000423089 438 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 AL589794.1-201ENST00000424971 390 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 SETP5-201ENST00000437270 562 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 AC004866.2-201ENST00000438285 481 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 RPL7AP71-201ENST00000451120 739 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 AL034369.1-201ENST00000453808 477 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 AC109925.1-201ENST00000478069 331 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 SNX18P23-201ENST00000510867 677 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 SYF2P1-201ENST00000550658 413 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.02□□□□□ -1.45
USB1Q9BQ65 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USB1Q9BQ65 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.02□□□□□ -1.45
USB1Q9BQ65 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USB1Q9BQ65 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms