Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
VRK1Q99986 ST13P14-201ENST00000474095 734 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
VRK1Q99986 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.46□□□□□ -1.7
VRK1Q99986 AL139099.1-201ENST00000497398 403 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 AC019235.1-201ENST00000503847 207 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 AC010587.1-201ENST00000505809 469 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK1Q99986 AC004980.4-201ENST00000513375 203 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.46□□□□□ -1.7
VRK1Q99986 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK1Q99986 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK1Q99986 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VRK1Q99986 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.46□□□□□ -1.7
VRK1Q99986 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.46□□□□□ -1.7
VRK1Q99986 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK1Q99986 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.46□□□□□ -1.7
VRK1Q99986 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VRK1Q99986 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.46□□□□□ -1.7
VRK1Q99986 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.46□□□□□ -1.7
VRK1Q99986 AC073091.2-201ENST00000603205 907 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 AL391813.2-201ENST00000609113 322 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 AL590282.1-201ENST00000610379 1136 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VRK1Q99986 AL590099.1-201ENST00000615276 138 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 AC009268.2-201ENST00000621925 457 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 AL353662.3-201ENST00000625131 237 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.46□□□□□ -1.7
VRK1Q99986 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.46□□□□□ -1.7
VRK1Q99986 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VRK1Q99986 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VRK1Q99986 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VRK1Q99986 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.45□□□□□ -1.7
VRK1Q99986 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VRK1Q99986 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VRK1Q99986 RNU5E-1-201ENST00000362477 120 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 Y_RNA.372-201ENST00000365599 102 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 Y_RNA.493-201ENST00000384422 102 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 CALM2P3-201ENST00000400429 449 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 RN7SKP16-201ENST00000410180 299 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.45□□□□□ -1.7
VRK1Q99986 AC233728.2-201ENST00000425348 757 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 AL590762.4-201ENST00000425885 253 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 RBMY2QP-201ENST00000429799 1147 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 AC073464.1-201ENST00000429823 534 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 FCF1P1-201ENST00000432690 571 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.45□□□□□ -1.7
VRK1Q99986 USP9YP15-201ENST00000442391 422 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 AC073587.1-201ENST00000447093 876 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 Z99127.3-201ENST00000448158 395 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 AC092647.2-201ENST00000452998 253 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 MTND1P12-201ENST00000455231 147 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 AC079168.1-201ENST00000458741 345 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.45□□□□□ -1.7
VRK1Q99986 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.45□□□□□ -1.7
VRK1Q99986 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.45□□□□□ -1.7
VRK1Q99986 RN7SKP260-201ENST00000516907 149 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 AC105031.1-201ENST00000518550 476 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.45□□□□□ -1.7
VRK1Q99986 AP000676.2-201ENST00000529711 301 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 OR4P1P-201ENST00000530808 1136 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.45□□□□□ -1.7
VRK1Q99986 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.45□□□□□ -1.7
VRK1Q99986 MIR4458-201ENST00000578872 75 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 MIR3146-201ENST00000580367 79 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 MIR4436B2-201ENST00000581415 91 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 MIR4436B1-201ENST00000583272 91 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.45□□□□□ -1.7
VRK1Q99986 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.45□□□□□ -1.7
VRK1Q99986 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.45□□□□□ -1.7
VRK1Q99986 AC011451.2-201ENST00000604303 598 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 Mico1.1-201ENST00000611698 204 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 AC007014.2-201ENST00000615581 479 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.45□□□□□ -1.7
VRK1Q99986 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
VRK1Q99986 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VRK1Q99986 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
VRK1Q99986 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.45□□□□□ -1.7
VRK1Q99986 AC004520.1-201ENST00000608362 1413 ntBASIC4.45□□□□□ -1.7
VRK1Q99986 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
VRK1Q99986 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.45□□□□□ -1.7
VRK1Q99986 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VRK1Q99986 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VRK1Q99986 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VRK1Q99986 NMD3P1-201ENST00000439704 1488 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 AP001273.1-201ENST00000624493 3152 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 Y_RNA.1-201ENST00000352915 104 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 RNA5SP90-201ENST00000364801 99 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 RNU4-12P-201ENST00000365233 139 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VRK1Q99986 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK1Q99986 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VRK1Q99986 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.44□□□□□ -1.7
VRK1Q99986 AL590002.1-201ENST00000406554 418 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 AC069157.1-201ENST00000421749 137 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK1Q99986 MTND1P2-201ENST00000430604 821 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 AL161722.2-201ENST00000434731 981 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms