Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 VN1R34P-201ENST00000447387 883 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 AC097262.1-201ENST00000452559 548 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 RN7SL293P-201ENST00000481765 281 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.34□□□□□ -1.71
MEIS3Q99687 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.34□□□□□ -1.71
MEIS3Q99687 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MEIS3Q99687 HSPE1P23-201ENST00000509838 286 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.34□□□□□ -1.71
MEIS3Q99687 IGKV2-26-201ENST00000518305 343 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.34□□□□□ -1.71
MEIS3Q99687 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.34□□□□□ -1.71
MEIS3Q99687 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.34□□□□□ -1.71
MEIS3Q99687 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.34□□□□□ -1.71
MEIS3Q99687 VN1R90P-201ENST00000595717 726 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 VN1R82P-201ENST00000601481 356 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 OR2BH1P-201ENST00000608850 864 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 AP004607.9-201ENST00000618202 316 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.34□□□□□ -1.71
MEIS3Q99687 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MEIS3Q99687 AC127502.3-201ENST00000636170 1206 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.34□□□□□ -1.71
MEIS3Q99687 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MEIS3Q99687 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MEIS3Q99687 MTCO1P18-201ENST00000455518 1419 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MEIS3Q99687 CEP170P1-201ENST00000502249 4587 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MEIS3Q99687 AC027514.1-201ENST00000588561 1603 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MEIS3Q99687 AC107021.2-201ENST00000567714 2095 ntBASIC4.34□□□□□ -1.71
MEIS3Q99687 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
MEIS3Q99687 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
MEIS3Q99687 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.33□□□□□ -1.72
MEIS3Q99687 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
MEIS3Q99687 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MEIS3Q99687 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MEIS3Q99687 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
MEIS3Q99687 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.33□□□□□ -1.72
MEIS3Q99687 NMD3P1-201ENST00000439704 1488 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
MEIS3Q99687 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MEIS3Q99687 Y_RNA.465-201ENST00000384293 102 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 RNU6-729P-201ENST00000384399 107 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 MIR183-201ENST00000384958 110 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MEIS3Q99687 Y_RNA.604-201ENST00000410574 102 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 UBE2V1P10-201ENST00000414685 269 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.33□□□□□ -1.72
MEIS3Q99687 NPM1P11-201ENST00000417106 855 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.33□□□□□ -1.72
MEIS3Q99687 AL159987.2-201ENST00000432754 307 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 BMS1P19-201ENST00000433925 393 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.33□□□□□ -1.72
MEIS3Q99687 AL157827.1-201ENST00000447622 132 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 AL050341.1-201ENST00000447743 313 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MEIS3Q99687 AC008565.1-201ENST00000509046 885 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MEIS3Q99687 snoZ278.1-201ENST00000517059 112 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.33□□□□□ -1.72
MEIS3Q99687 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.33□□□□□ -1.72
MEIS3Q99687 AC005476.1-201ENST00000554427 397 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 NBEAP1-201ENST00000554452 979 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.33□□□□□ -1.72
MEIS3Q99687 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.33□□□□□ -1.72
MEIS3Q99687 AC006362.1-201ENST00000567392 174 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 AC011260.1-201ENST00000578420 472 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 MIR5708-201ENST00000579723 85 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.33□□□□□ -1.72
MEIS3Q99687 AC006539.2-201ENST00000601729 572 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 AC073648.5-201ENST00000603502 305 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 AC116165.2-201ENST00000616705 206 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.33□□□□□ -1.72
MEIS3Q99687 U6.105-201ENST00000637379 88 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.33□□□□□ -1.72
MEIS3Q99687 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.33□□□□□ -1.72
MEIS3Q99687 AL356274.2-201ENST00000624379 3752 ntBASIC4.33□□□□□ -1.72
MEIS3Q99687 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MEIS3Q99687 MTND5P29-201ENST00000458676 1807 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MEIS3Q99687 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MEIS3Q99687 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.32□□□□□ -1.72
MEIS3Q99687 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.32□□□□□ -1.72
MEIS3Q99687 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MEIS3Q99687 AC032011.1-201ENST00000611703 1549 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.32□□□□□ -1.72
MEIS3Q99687 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.32□□□□□ -1.72
MEIS3Q99687 AC025263.3-201ENST00000622965 1396 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 AC018529.3-201ENST00000624212 2254 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MEIS3Q99687 snoZ40.1-201ENST00000364540 72 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MEIS3Q99687 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
MEIS3Q99687 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.32□□□□□ -1.72
MEIS3Q99687 HMGB3P31-201ENST00000413333 595 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 Z75741.2-201ENST00000417272 1167 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 AC098592.1-201ENST00000419352 333 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 FO393419.3-201ENST00000428741 282 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms