Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.83□□□□□ -1.64
HPS3Q969F9 AL732292.1-201ENST00000426692 226 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 AL590233.1-201ENST00000430017 456 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 DLGAP5P1-201ENST00000430307 464 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.83□□□□□ -1.64
HPS3Q969F9 RPL23AP52-201ENST00000439311 478 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 SDCBPP1-201ENST00000440192 890 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 AC114495.1-201ENST00000441274 436 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 ATP5C1P1-201ENST00000441945 895 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.83□□□□□ -1.64
HPS3Q969F9 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.83□□□□□ -1.64
HPS3Q969F9 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.83□□□□□ -1.64
HPS3Q969F9 SSXP1-201ENST00000453640 473 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 AL672167.3-201ENST00000465951 960 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.83□□□□□ -1.64
HPS3Q969F9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.83□□□□□ -1.64
HPS3Q969F9 PRELID3BP7-201ENST00000503606 469 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.83□□□□□ -1.64
HPS3Q969F9 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.83□□□□□ -1.64
HPS3Q969F9 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.83□□□□□ -1.64
HPS3Q969F9 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HPS3Q969F9 OR8L1P-201ENST00000534005 955 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.83□□□□□ -1.64
HPS3Q969F9 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.83□□□□□ -1.64
HPS3Q969F9 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.83□□□□□ -1.64
HPS3Q969F9 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.83□□□□□ -1.64
HPS3Q969F9 AC079587.1-201ENST00000603846 277 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 AC090425.2-201ENST00000608818 501 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 AC104073.3-201ENST00000610942 955 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 AC010678.1-201ENST00000614118 713 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 AC027807.2-201ENST00000616099 408 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 AC139713.2-214ENST00000642059 1811 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 AC006378.2-201ENST00000623178 2476 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HPS3Q969F9 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HPS3Q969F9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.82□□□□□ -1.64
HPS3Q969F9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.82□□□□□ -1.64
HPS3Q969F9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HPS3Q969F9 PNPT1P2-201ENST00000456768 2050 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 DCAF13P1-201ENST00000495256 1330 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS3Q969F9 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 OR5H15-201ENST00000383696 930 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS3Q969F9 AL663109.1-201ENST00000411498 844 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HPS3Q969F9 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS3Q969F9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HPS3Q969F9 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.82□□□□□ -1.64
HPS3Q969F9 AC096638.2-201ENST00000434965 711 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 SKP1P1-201ENST00000438081 489 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.82□□□□□ -1.64
HPS3Q969F9 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.82□□□□□ -1.64
HPS3Q969F9 CDC27P1-201ENST00000445384 715 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.82□□□□□ -1.64
HPS3Q969F9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.82□□□□□ -1.64
HPS3Q969F9 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.82□□□□□ -1.64
HPS3Q969F9 RPS20P24-201ENST00000457473 361 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 AC013356.1-201ENST00000489027 564 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 AP001025.2-201ENST00000490908 477 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 OR5H5P-201ENST00000503164 928 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.82□□□□□ -1.64
HPS3Q969F9 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.82□□□□□ -1.64
HPS3Q969F9 MTCO2P32-201ENST00000514865 403 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 HIGD1AP3-201ENST00000515857 278 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 IGHV3-32-201ENST00000519182 355 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 AC024224.1-201ENST00000538284 609 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
HPS3Q969F9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.82□□□□□ -1.64
HPS3Q969F9 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.82□□□□□ -1.64
HPS3Q969F9 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS3Q969F9 AL390208.1-201ENST00000605885 644 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS3Q969F9 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS3Q969F9 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.82□□□□□ -1.64
HPS3Q969F9 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS3Q969F9 AL392088.2-201ENST00000637607 285 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HPS3Q969F9 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
HPS3Q969F9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS3Q969F9 AC006971.1-201ENST00000407916 4486 ntBASIC4.82□□□□□ -1.64
HPS3Q969F9 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
HPS3Q969F9 AC105074.1-201ENST00000623380 3095 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 AC092104.1-201ENST00000497346 1441 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HPS3Q969F9 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.81□□□□□ -1.64
HPS3Q969F9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS3Q969F9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS3Q969F9 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS3Q969F9 OR11H4-201ENST00000315409 1082 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HPS3Q969F9 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HPS3Q969F9 Y_RNA.97-201ENST00000363094 102 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 RNA5SP447-201ENST00000363749 119 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 RNU5E-5P-201ENST00000365379 116 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 MIR153-1-201ENST00000384914 90 ntBASIC4.81□□□□□ -1.64
HPS3Q969F9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS3Q969F9 RNU2-15P-201ENST00000410692 191 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 160.8 ms