Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC025181.1-201ENST00000477507 416 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 AC004696.1-201ENST00000614345 607 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 CTSLP2-204ENST00000629029 392 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 AC093909.5-201ENST00000621839 1799 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 AP001148.1-201ENST00000624124 2359 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 RNA5SP107-201ENST00000411358 122 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 PTP4A1P1-201ENST00000420539 515 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 CACYBPP2-201ENST00000453625 678 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 RN7SKP210-201ENST00000459176 261 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 AC092436.1-201ENST00000506450 503 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 AC147055.1-201ENST00000509261 750 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 CD24P2-201ENST00000565486 219 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 AC016727.1-205ENST00000605437 569 ntBASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
ALMS1Q8TCU4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 RNU4-53P-201ENST00000410828 140 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC093151.1-201ENST00000427711 313 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 RPS20P5-201ENST00000434808 360 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 RPL21P18-201ENST00000469899 480 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 RNA5SP217-201ENST00000515959 91 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC009063.1-201ENST00000563342 702 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC010620.2-201ENST00000600135 313 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC004925.1-201ENST00000624256 2706 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC092881.1-201ENST00000638218 2733 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC091564.4-201ENST00000533934 2194 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC245054.2-201ENST00000415639 319 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 DNAJC19P1-201ENST00000455312 319 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC093331.1-201ENST00000521474 169 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 OR4A45P-201ENST00000529954 901 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC010680.4-201ENST00000605334 543 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC099778.2-201ENST00000610904 211 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 DYNLT3P1-201ENST00000378574 347 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 RNU6-76P-201ENST00000384060 104 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 RPS27P5-201ENST00000444247 244 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 RN7SL75P-201ENST00000461926 281 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AP006248.2-201ENST00000623309 592 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 AC117529.2-201ENST00000512159 2068 ntBASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ALMS1Q8TCU4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 AL591806.2-201ENST00000433122 173 ntBASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 PTGES3P5-201ENST00000455109 434 ntBASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 AC044913.1-201ENST00000557200 430 ntBASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 U6.98-201ENST00000637157 84 ntBASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 RNA5SP99-201ENST00000364020 114 ntBASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 RNA5SP295-201ENST00000362655 121 ntBASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 RNA5SP383-201ENST00000362934 120 ntBASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 RN7SKP58-201ENST00000411010 305 ntBASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 AC106901.1-201ENST00000425086 698 ntBASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 AL590639.1-201ENST00000456484 337 ntBASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 AP000867.2-201ENST00000532468 320 ntBASIC1.81□□□□□ -2.12
ALMS1Q8TCU4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms