Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SNORD113-7-201ENST00000363762 77 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 RNU6-266P-201ENST00000364225 107 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 RNU4-2-201ENST00000365668 141 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 RPSAP35-201ENST00000413753 818 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 ARL5AP1-201ENST00000418991 388 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 REREP1Y-201ENST00000422655 198 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AC137499.1-201ENST00000427602 88 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 RPS24P8-201ENST00000431490 402 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 NDUFB4P8-201ENST00000435351 367 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 REREP2Y-201ENST00000439103 200 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 RPL36AP15-201ENST00000444514 266 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 HSFY6P-201ENST00000445573 403 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 MTND1P17-201ENST00000448961 204 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AL118520.1-201ENST00000450770 291 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 RN7SL72P-201ENST00000460697 269 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 RPL23AP11-201ENST00000475260 469 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 RN7SL583P-201ENST00000475692 287 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AL161747.1-201ENST00000480068 358 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 SLC25A15P5-201ENST00000508033 253 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 RNU2-53P-201ENST00000516257 147 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 SCARNA21.2-201ENST00000516600 166 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 SNORA43.3-201ENST00000517240 103 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AC023157.2-201ENST00000540596 141 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 SULT1C2P1-202ENST00000562418 459 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AC105224.1-201ENST00000587055 421 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AC004805.2-201ENST00000605382 482 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AC098479.1-201ENST00000609225 154 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 MIR6768-201ENST00000610734 72 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AC016745.2-201ENST00000608834 3443 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 RNU6-774P-201ENST00000363238 107 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 Y_RNA.288-201ENST00000364854 92 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 UBE2V1P2-201ENST00000397758 440 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 RN7SKP222-201ENST00000410651 315 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AL133482.1-201ENST00000415988 498 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 Z93019.1-201ENST00000416450 973 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AC096632.1-201ENST00000427395 310 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 MTATP6P16-201ENST00000434543 526 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AC073465.2-201ENST00000440938 498 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 RPL35AP28-201ENST00000459730 331 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 RPL21P71-201ENST00000465598 459 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 UBA52P3-201ENST00000491303 382 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AC097486.1-201ENST00000515331 210 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 RN7SKP99-201ENST00000517028 307 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 RNU6-699P-201ENST00000517081 110 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AC090136.1-201ENST00000520009 240 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AC022404.1-201ENST00000555320 273 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AC022884.3-201ENST00000579571 248 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 MIR5583-1-201ENST00000580941 59 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 MIR3128-201ENST00000581957 66 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AC011626.1-201ENST00000604710 562 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AC104695.2-201ENST00000605056 775 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AC022467.1-201ENST00000614738 749 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 uc_338.34-201ENST00000617467 174 ntBASIC5.04□□□□□ -1.6
ATG4DQ86TL0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms