Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CALD1Q05682 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.47□□□□□ -1.69
CALD1Q05682 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CALD1Q05682 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CALD1Q05682 RNA5SP167-201ENST00000365461 116 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CALD1Q05682 RNU6-1226P-201ENST00000384317 107 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 RNU6-1257P-201ENST00000384625 110 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 MIR183-201ENST00000384958 110 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CALD1Q05682 AC233981.1-201ENST00000423224 461 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 AP000907.1-201ENST00000428428 510 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 AL159987.2-201ENST00000432754 307 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 AL358232.1-201ENST00000448030 501 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.47□□□□□ -1.69
CALD1Q05682 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.47□□□□□ -1.69
CALD1Q05682 AP002884.2-201ENST00000471647 395 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 TMEM248P1-201ENST00000510579 951 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 AC008837.1-201ENST00000511513 412 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 RNU6-885P-201ENST00000516607 104 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 AC023632.1-201ENST00000518463 375 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 AC104417.1-201ENST00000523974 751 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.47□□□□□ -1.69
CALD1Q05682 AC044913.1-201ENST00000557200 430 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 AC037471.2-201ENST00000564941 598 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.47□□□□□ -1.69
CALD1Q05682 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.47□□□□□ -1.69
CALD1Q05682 U6.105-201ENST00000637379 88 ntBASIC4.47□□□□□ -1.69
CALD1Q05682 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.69
CALD1Q05682 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CALD1Q05682 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.46□□□□□ -1.69
CALD1Q05682 AL133383.2-201ENST00000622958 2336 ntBASIC4.46□□□□□ -1.69
CALD1Q05682 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CALD1Q05682 SRP72P2-201ENST00000344851 1979 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 MTND5P31-201ENST00000419366 1374 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CALD1Q05682 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CALD1Q05682 RNU1-33P-201ENST00000364249 162 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CALD1Q05682 RNU6-921P-201ENST00000384361 107 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CALD1Q05682 AL355379.1-201ENST00000405542 640 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 AL139098.1-201ENST00000407291 389 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.46□□□□□ -1.7
CALD1Q05682 RPS3AP9-201ENST00000417027 792 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.46□□□□□ -1.7
CALD1Q05682 AC114973.1-201ENST00000429057 632 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 AL158071.1-201ENST00000430315 461 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 AC005019.1-201ENST00000436455 431 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 CYCSP43-201ENST00000438233 310 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 NDUFA5P7-201ENST00000452914 242 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.46□□□□□ -1.7
CALD1Q05682 AC092451.1-201ENST00000480211 153 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CALD1Q05682 AC092185.1-201ENST00000491371 97 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 FCF1P3-201ENST00000496394 590 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 AC112198.1-201ENST00000505369 1220 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.46□□□□□ -1.7
CALD1Q05682 Vault.1-201ENST00000516474 102 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 IGKV2-26-201ENST00000518305 343 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.46□□□□□ -1.7
CALD1Q05682 OR4R3P-201ENST00000525084 838 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.46□□□□□ -1.7
CALD1Q05682 AC007458.1-201ENST00000542812 373 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.46□□□□□ -1.7
CALD1Q05682 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.46□□□□□ -1.7
CALD1Q05682 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.46□□□□□ -1.7
CALD1Q05682 MIR92B-201ENST00000607575 96 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 AL136370.1-201ENST00000608166 691 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 AC098679.5-201ENST00000624394 571 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CALD1Q05682 AC017071.1-201ENST00000564407 2204 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 MTCO1P12-201ENST00000414273 1543 ntBASIC4.46□□□□□ -1.7
CALD1Q05682 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CALD1Q05682 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CALD1Q05682 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.45□□□□□ -1.7
CALD1Q05682 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CALD1Q05682 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CALD1Q05682 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
CALD1Q05682 AL513302.2-201ENST00000562313 1842 ntBASIC4.45□□□□□ -1.7
CALD1Q05682 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CALD1Q05682 RNA5SP171-201ENST00000391071 115 ntBASIC4.45□□□□□ -1.7
CALD1Q05682 C1DP1-201ENST00000426049 402 ntBASIC4.45□□□□□ -1.7
CALD1Q05682 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.45□□□□□ -1.7
CALD1Q05682 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.45□□□□□ -1.7
CALD1Q05682 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.45□□□□□ -1.7
CALD1Q05682 AL590399.6-201ENST00000446396 307 ntBASIC4.45□□□□□ -1.7
CALD1Q05682 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CALD1Q05682 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.45□□□□□ -1.7
CALD1Q05682 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.45□□□□□ -1.7
CALD1Q05682 GAPDHP39-201ENST00000481866 979 ntBASIC4.45□□□□□ -1.7
CALD1Q05682 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.45□□□□□ -1.7
CALD1Q05682 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.45□□□□□ -1.7
CALD1Q05682 RN7SKP60-201ENST00000516985 239 ntBASIC4.45□□□□□ -1.7
CALD1Q05682 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CALD1Q05682 OR8K4P-201ENST00000534608 872 ntBASIC4.45□□□□□ -1.7
CALD1Q05682 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.45□□□□□ -1.7
CALD1Q05682 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.45□□□□□ -1.7
CALD1Q05682 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms