Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.24□□□□□ -1.89
TPM4P67936 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.24□□□□□ -1.89
TPM4P67936 PDSS1P2-201ENST00000449397 678 ntBASIC3.24□□□□□ -1.89
TPM4P67936 OR6K1P-201ENST00000456766 971 ntBASIC3.24□□□□□ -1.89
TPM4P67936 HMGB1P25-201ENST00000468402 607 ntBASIC3.24□□□□□ -1.89
TPM4P67936 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
TPM4P67936 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TPM4P67936 RN7SKP96-201ENST00000516948 297 ntBASIC3.24□□□□□ -1.89
TPM4P67936 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.24□□□□□ -1.89
TPM4P67936 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.24□□□□□ -1.89
TPM4P67936 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TPM4P67936 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
TPM4P67936 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.24□□□□□ -1.89
TPM4P67936 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.24□□□□□ -1.89
TPM4P67936 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.24□□□□□ -1.89
TPM4P67936 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.24□□□□□ -1.89
TPM4P67936 AC068831.7-201ENST00000616954 363 ntBASIC3.24□□□□□ -1.89
TPM4P67936 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.24□□□□□ -1.89
TPM4P67936 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
TPM4P67936 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TPM4P67936 RNU1-64P-201ENST00000365443 163 ntBASIC3.23□□□□□ -1.89
TPM4P67936 MTND4P13-201ENST00000402078 1023 ntBASIC3.23□□□□□ -1.89
TPM4P67936 RNU4-65P-201ENST00000410473 140 ntBASIC3.23□□□□□ -1.89
TPM4P67936 RNU6-1077P-201ENST00000410506 102 ntBASIC3.23□□□□□ -1.89
TPM4P67936 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.23□□□□□ -1.89
TPM4P67936 EIF2S2P3-201ENST00000428356 999 ntBASIC3.23□□□□□ -1.89
TPM4P67936 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.23□□□□□ -1.89
TPM4P67936 RPL7P29-201ENST00000437151 728 ntBASIC3.23□□□□□ -1.89
TPM4P67936 AL359893.1-201ENST00000447628 1580 ntBASIC3.23□□□□□ -1.89
TPM4P67936 HMGB1P15-201ENST00000453854 435 ntBASIC3.23□□□□□ -1.89
TPM4P67936 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.23□□□□□ -1.89
TPM4P67936 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.23□□□□□ -1.89
TPM4P67936 snoU13.3-201ENST00000459441 104 ntBASIC3.23□□□□□ -1.89
TPM4P67936 AC010285.1-201ENST00000470580 392 ntBASIC3.23□□□□□ -1.89
TPM4P67936 AC087879.1-201ENST00000474343 374 ntBASIC3.23□□□□□ -1.89
TPM4P67936 RN7SL293P-201ENST00000481765 281 ntBASIC3.23□□□□□ -1.89
TPM4P67936 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.23□□□□□ -1.89
TPM4P67936 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.23□□□□□ -1.89
TPM4P67936 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.23□□□□□ -1.89
TPM4P67936 AC239860.2-201ENST00000525886 270 ntBASIC3.23□□□□□ -1.89
TPM4P67936 HIGD1AP5-201ENST00000529959 259 ntBASIC3.23□□□□□ -1.89
TPM4P67936 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.23□□□□□ -1.89
TPM4P67936 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.23□□□□□ -1.89
TPM4P67936 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.23□□□□□ -1.89
TPM4P67936 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.23□□□□□ -1.89
TPM4P67936 AC007566.2-201ENST00000603642 413 ntBASIC3.23□□□□□ -1.89
TPM4P67936 AL136295.6-201ENST00000610486 658 ntBASIC3.23□□□□□ -1.89
TPM4P67936 AL110115.1-201ENST00000614396 364 ntBASIC3.23□□□□□ -1.89
TPM4P67936 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TPM4P67936 AC091953.5-201ENST00000622919 233 ntBASIC3.23□□□□□ -1.89
TPM4P67936 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
TPM4P67936 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TPM4P67936 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TPM4P67936 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.23□□□□□ -1.89
TPM4P67936 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TPM4P67936 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TPM4P67936 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TPM4P67936 RNU6-1243P-201ENST00000364028 107 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.22□□□□□ -1.89
TPM4P67936 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
TPM4P67936 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TPM4P67936 AL512633.1-201ENST00000399931 655 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AL353692.2-201ENST00000407054 335 ntBASIC3.22□□□□□ -1.89
TPM4P67936 MIR1193-201ENST00000408109 78 ntBASIC3.22□□□□□ -1.89
TPM4P67936 RNU6-564P-201ENST00000410983 104 ntBASIC3.22□□□□□ -1.89
TPM4P67936 RAB28P1-201ENST00000411517 641 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.22□□□□□ -1.89
TPM4P67936 YPEL5P1-201ENST00000419731 367 ntBASIC3.22□□□□□ -1.89
TPM4P67936 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.22□□□□□ -1.89
TPM4P67936 AC233728.2-201ENST00000425348 757 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AC104332.2-201ENST00000429959 156 ntBASIC3.22□□□□□ -1.89
TPM4P67936 KCTD10P1-201ENST00000434203 625 ntBASIC3.22□□□□□ -1.89
TPM4P67936 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.22□□□□□ -1.89
TPM4P67936 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.22□□□□□ -1.89
TPM4P67936 AC008155.2-201ENST00000464337 397 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AC117440.1-201ENST00000474107 571 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AC006499.5-201ENST00000505037 514 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.22□□□□□ -1.89
TPM4P67936 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.22□□□□□ -1.89
TPM4P67936 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.22□□□□□ -1.89
TPM4P67936 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.22□□□□□ -1.89
TPM4P67936 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.22□□□□□ -1.89
TPM4P67936 SETP2-201ENST00000553886 926 ntBASIC3.22□□□□□ -1.89
TPM4P67936 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.22□□□□□ -1.89
TPM4P67936 AC107954.1-201ENST00000565906 727 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.22□□□□□ -1.89
TPM4P67936 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.22□□□□□ -1.89
TPM4P67936 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.22□□□□□ -1.89
TPM4P67936 VIS1.1-201ENST00000610517 203 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AL162574.2-201ENST00000614618 657 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AC002076.2-201ENST00000617362 122 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AL391597.1-201ENST00000618707 694 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AC068831.8-201ENST00000620171 435 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AC039056.2-201ENST00000622261 511 ntBASIC3.22□□□□□ -1.89
TPM4P67936 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AL356863.1-201ENST00000623378 1080 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AC012442.3-202ENST00000636742 206 ntBASIC3.22□□□□□ -1.89
TPM4P67936 AC080100.1-201ENST00000624239 5356 ntBASIC3.22□□□□□ -1.89
TPM4P67936 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.22□□□□□ -1.89
TPM4P67936 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms