Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AL358832.1-201ENST00000497800 389 ntBASIC2.23□□□□□ -2.05
SNCAP37840 SEM1P1-201ENST00000506694 209 ntBASIC2.23□□□□□ -2.05
SNCAP37840 AC117522.3-201ENST00000507974 584 ntBASIC2.23□□□□□ -2.05
SNCAP37840 PTGES3P3-201ENST00000511479 482 ntBASIC2.23□□□□□ -2.05
SNCAP37840 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.23□□□□□ -2.05
SNCAP37840 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.23□□□□□ -2.05
SNCAP37840 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.23□□□□□ -2.05
SNCAP37840 MIR4446-201ENST00000578505 67 ntBASIC2.23□□□□□ -2.05
SNCAP37840 DUXAP4-201ENST00000603046 613 ntBASIC2.23□□□□□ -2.05
SNCAP37840 AC005229.3-201ENST00000603438 323 ntBASIC2.23□□□□□ -2.05
SNCAP37840 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.23□□□□□ -2.05
SNCAP37840 AC006023.2-201ENST00000609916 167 ntBASIC2.23□□□□□ -2.05
SNCAP37840 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.23□□□□□ -2.05
SNCAP37840 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SNCAP37840 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SNCAP37840 AC096644.4-201ENST00000563417 2912 ntBASIC2.23□□□□□ -2.05
SNCAP37840 MTND5P1-201ENST00000445440 1375 ntBASIC2.23□□□□□ -2.05
SNCAP37840 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.22□□□□□ -2.05
SNCAP37840 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.22□□□□□ -2.05
SNCAP37840 AL136520.1-201ENST00000600311 1322 ntBASIC2.22□□□□□ -2.05
SNCAP37840 MIR422A-201ENST00000362286 90 ntBASIC2.22□□□□□ -2.05
SNCAP37840 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.22□□□□□ -2.05
SNCAP37840 SNORA51.2-201ENST00000364595 132 ntBASIC2.22□□□□□ -2.05
SNCAP37840 RNU1-138P-201ENST00000384093 164 ntBASIC2.22□□□□□ -2.05
SNCAP37840 RNU6-356P-201ENST00000384140 107 ntBASIC2.22□□□□□ -2.05
SNCAP37840 RNVU1-14-201ENST00000384770 164 ntBASIC2.22□□□□□ -2.05
SNCAP37840 MIR34B-201ENST00000385076 84 ntBASIC2.22□□□□□ -2.05
SNCAP37840 DUTP6-201ENST00000425573 462 ntBASIC2.22□□□□□ -2.05
SNCAP37840 AC006994.1-201ENST00000438212 839 ntBASIC2.22□□□□□ -2.05
SNCAP37840 Z96811.1-201ENST00000445880 108 ntBASIC2.22□□□□□ -2.05
SNCAP37840 HMGB1P5-202ENST00000451497 985 ntBASIC2.22□□□□□ -2.05
SNCAP37840 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.22□□□□□ -2.05
SNCAP37840 SRIP1-201ENST00000489235 288 ntBASIC2.22□□□□□ -2.05
SNCAP37840 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.22□□□□□ -2.05
SNCAP37840 MTATP6P22-201ENST00000507369 598 ntBASIC2.22□□□□□ -2.05
SNCAP37840 HMGB1P23-201ENST00000518743 568 ntBASIC2.22□□□□□ -2.05
SNCAP37840 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.22□□□□□ -2.05
SNCAP37840 PTP4A1P6-201ENST00000531034 478 ntBASIC2.22□□□□□ -2.05
SNCAP37840 OR4U1P-201ENST00000554958 912 ntBASIC2.22□□□□□ -2.05
SNCAP37840 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.22□□□□□ -2.05
SNCAP37840 AC006539.2-201ENST00000601729 572 ntBASIC2.22□□□□□ -2.05
SNCAP37840 RPL12P50-201ENST00000603116 116 ntBASIC2.22□□□□□ -2.05
SNCAP37840 AC124312.4-201ENST00000605533 310 ntBASIC2.22□□□□□ -2.05
SNCAP37840 FO624990.1-201ENST00000636373 85 ntBASIC2.22□□□□□ -2.05
SNCAP37840 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.22□□□□□ -2.05
SNCAP37840 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.05
SNCAP37840 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNCAP37840 AC073055.1-201ENST00000456901 1621 ntBASIC2.21□□□□□ -2.06
SNCAP37840 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SNCAP37840 RNVU1-3-201ENST00000364313 161 ntBASIC2.21□□□□□ -2.06
SNCAP37840 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SNCAP37840 AL034374.1-201ENST00000406329 351 ntBASIC2.21□□□□□ -2.06
SNCAP37840 SSR1P1-201ENST00000407630 814 ntBASIC2.21□□□□□ -2.06
SNCAP37840 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.21□□□□□ -2.06
SNCAP37840 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.21□□□□□ -2.06
SNCAP37840 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.21□□□□□ -2.06
SNCAP37840 AC008065.1-201ENST00000428525 348 ntBASIC2.21□□□□□ -2.06
SNCAP37840 RPL21P112-201ENST00000434403 463 ntBASIC2.21□□□□□ -2.06
SNCAP37840 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.21□□□□□ -2.06
SNCAP37840 CALM1P2-201ENST00000452941 448 ntBASIC2.21□□□□□ -2.06
SNCAP37840 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.21□□□□□ -2.06
SNCAP37840 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.21□□□□□ -2.06
SNCAP37840 RPL37P3-201ENST00000456825 293 ntBASIC2.21□□□□□ -2.06
SNCAP37840 HMGB1P3-201ENST00000502802 616 ntBASIC2.21□□□□□ -2.06
SNCAP37840 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.21□□□□□ -2.06
SNCAP37840 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.21□□□□□ -2.06
SNCAP37840 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.21□□□□□ -2.06
SNCAP37840 RN7SKP57-201ENST00000517248 293 ntBASIC2.21□□□□□ -2.06
SNCAP37840 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.21□□□□□ -2.06
SNCAP37840 AL121594.4-201ENST00000556211 1196 ntBASIC2.21□□□□□ -2.06
SNCAP37840 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.21□□□□□ -2.06
SNCAP37840 AC233263.6-201ENST00000631132 1963 ntBASIC2.21□□□□□ -2.06
SNCAP37840 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.21□□□□□ -2.06
SNCAP37840 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNCAP37840 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SNCAP37840 MIR142-201ENST00000384835 87 ntBASIC2.2□□□□□ -2.06
SNCAP37840 MT-TP-201ENST00000387461 68 ntBASIC2.2□□□□□ -2.06
SNCAP37840 FO393413.1-201ENST00000402892 195 ntBASIC2.2□□□□□ -2.06
SNCAP37840 RN7SKP222-201ENST00000410651 315 ntBASIC2.2□□□□□ -2.06
SNCAP37840 AC004022.2-201ENST00000413824 193 ntBASIC2.2□□□□□ -2.06
SNCAP37840 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.2□□□□□ -2.06
SNCAP37840 AC005517.2-201ENST00000424673 553 ntBASIC2.2□□□□□ -2.06
SNCAP37840 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.2□□□□□ -2.06
SNCAP37840 RPL17P49-201ENST00000443728 411 ntBASIC2.2□□□□□ -2.06
SNCAP37840 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.2□□□□□ -2.06
SNCAP37840 OR7L1P-201ENST00000456181 380 ntBASIC2.2□□□□□ -2.06
SNCAP37840 RPL37P6-202ENST00000464216 403 ntBASIC2.2□□□□□ -2.06
SNCAP37840 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.2□□□□□ -2.06
SNCAP37840 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SNCAP37840 SNORA31.11-201ENST00000516528 139 ntBASIC2.2□□□□□ -2.06
SNCAP37840 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.2□□□□□ -2.06
SNCAP37840 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNCAP37840 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.2□□□□□ -2.06
SNCAP37840 CCNG2P1-201ENST00000549521 1000 ntBASIC2.2□□□□□ -2.06
SNCAP37840 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.2□□□□□ -2.06
SNCAP37840 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.2□□□□□ -2.06
SNCAP37840 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.2□□□□□ -2.06
SNCAP37840 RPL23AP78-201ENST00000599928 470 ntBASIC2.2□□□□□ -2.06
SNCAP37840 HSPE1P14-201ENST00000605812 302 ntBASIC2.2□□□□□ -2.06
SNCAP37840 AL137847.3-201ENST00000611521 109 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms